Aquila chrysaetos chrysaetos (golden eagle): 115344252
Help
Entry
115344252 CDS
T08023
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X2
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115344252 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achc03019
]
115344252 (PNLDC1)
Enzymes [BR:
achc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
115344252 (PNLDC1)
Messenger RNA biogenesis [BR:
achc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115344252 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
115344252
NCBI-ProteinID:
XP_029877080
Ensembl:
ENSACCG00020004951
LinkDB
All DBs
Position
8:complement(10931455..10946600)
Genome browser
AA seq
536 aa
AA seq
DB search
MEVGAADFQRGLPRLRGRVRRAAFLALDMEFTGLHSTFPQNNQPSSGFVHSLFDSPAERY
LKARQSVQRFTVTQLGLAIFSNENSNKYVVHSYNFFLFPSMLGVTDVEFTLSASSIQFLS
HYGFDYNKFLKDGIPYMNEVQEKILSQHLLEGSWKVSSALDRDVLKKAIDEVTRWIGAAE
EEETMILQDLSGSQIFEVQLVLRQALPNVWTQPLGDKVMVKKVSPQHRQLLENSPDDCCQ
KELILLSARGFTNLFQTLVKAKKPLVGHNMLMDLMHLHDKFYKPLPESYEEFKRNIHNLF
PVLIDTKTITKSIWKKCQFPPVSNLLEVYATLCSSKDPKDPTCPVIALASDCSKYAEKKS
PHEAGYDAFLCGSVLLKSAHLLLCRFTDDAAEADPSFSQYLTVLAEYLNKVNFIRGGVSS
INFSGEDAPCRHPPLLVVHVQGWPGLNERQIYQEFKALCRFDVRRLSKNQFILLSNKFKH
VRLVLRDYKHHPHLRISVYRHWRHSPLVNCLLQVSSIVALWSLLAFVLGGAPCCSF
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgggggcggcggacttccagcggggcctgccgcgcctgcggggccgcgtccgc
cgcgccgccttcctggcccttgatatggagtttactggcttacattcaactttcccacaa
aataaccagcccagttctggttttgttcatagcctgtttgattcccctgcggagcggtac
ctgaaggccaggcagagcgtccagcgcttcactgttactcagcttgggctggcaatattc
tcaaatgaaaattcaaacaagtatgtggtgcattcatacaactttttcctctttccctca
atgctgggagttacagatgtcgaattcaccctttctgcatctagcattcagttcctgtct
cattatggctttgactataataagttcctcaaagatggaatcccatacatgaatgaggta
caggagaagatccttagccagcatctcttggagggtagctggaaagtcagcagtgccctg
gacagggatgtgctgaagaaggctattgatgaagtgacccgttggataggtgcagcagag
gaagaggagactatgattctgcaggatctgagtggctctcagatatttgaagttcagctg
gttctgagacaggctctcccaaatgtttggacacagcctcttggagacaaggtaatggtg
aaaaaagtgagtccacagcatcgtcagcttctggagaactcccctgacgactgctgccag
aaggagctcattctcctgtctgcccggggcttcaccaacctcttccagacacttgttaaa
gccaagaagcccctggtgggacacaacatgcttatggaccttatgcatcttcacgacaag
ttctacaagccccttccagaaagctatgaggaatttaaaaggaacattcacaacctgttt
cctgtcctcatagacaccaagactataacaaaatccatctggaagaaatgtcagtttcct
ccagtatctaatcttttggaggtatatgcaactttgtgcagcagcaaagatcccaaagat
ccaacgtgccccgtgatagctcttgcaagtgactgctcaaaatatgctgagaagaaatct
cctcatgaggcaggctatgacgcatttctctgtggttcagttcttctgaagtcagctcat
ttgctactgtgcagatttacagatgatgcagcggaggctgatccttctttctctcagtat
ctcaccgtgttagccgaatatctgaacaaagtgaatttcatccgaggtggcgtttcaagc
attaatttttctggggaagatgctccctgccgacatccgcctctcttggttgtccatgtc
caaggctggccagggctgaatgaaaggcagatttaccaagagtttaaagctctttgtcgc
tttgatgtcagacggctttcaaagaaccagttcattctgctgtccaataaatttaagcat
gtcaggcttgttctgcgagattataagcatcaccctcatctgcggatttctgtctatcgc
cactggagacactctccactcgtgaactgcctgctgcaagtctctagtattgtggcactg
tggtctctcttggcctttgtactcggaggagctccttgctgttcattctaa
DBGET
integrated database retrieval system
