Aquila chrysaetos chrysaetos (golden eagle): 115347688
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Entry
115347688 CDS
T08023
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc04382
Cornified envelope formation
achc04510
Focal adhesion
achc04512
ECM-receptor interaction
achc04518
Integrin signaling
achc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115347688 (COL4A3)
04518 Integrin signaling
115347688 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115347688 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115347688 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115347688 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
achc04147
]
115347688 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
achc00536
]
115347688 (COL4A3)
Exosome [BR:
achc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
115347688 (COL4A3)
Glycosaminoglycan binding proteins [BR:
achc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115347688 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
115347688
NCBI-ProteinID:
XP_029885133
LinkDB
All DBs
Position
10:complement(19270355..19336502)
Genome browser
AA seq
1763 aa
AA seq
DB search
MPAEDGRTDGGCRRCPRQETRGGEERGGEGWPGRPRPGQPRPLSPPQGAESAEAGAKQQP
PGQKPRAGGGQSPRALGRAPRDAAQAAPSAGMAGRGCPSRLAPLLVLALLWPGRAAAAAE
SCVCKGKSPCFCDSMKGSKGEKGFPGVPGPPGHRGFPGPEGPPGPQGPKGSPGLTGLVGP
KGIRGVPGIPGFSGPPGLPGEPGTVGPPGRSGVPGCNGTKGDRGFPGPPGRRGAPGILGI
AGIKGEKGCPADGYNQGYGAKGDPGLPGMPGLQGAQGAQGYPGELGPQGPPGASGMPGRA
GPPGPKGLMGLKVIGTKGRKGDTGLTGPPGPPGTVIVTLSGPDNTTDLKGEKGEKGSRGL
PGPMGFTGPVGDSQSEKGDQGEPGAQGKPGKEGAPGPPGLPGQKGEQGRPGLSGRQGAKG
MKGNTGPPGACGRTEYYDSVVGEKGDEGPPGPPGPKGQRGMPGPQGPPGGAGRPGVSRPG
LRGPPGFPGPKGTKGEKGQTGLCIVGPPGLPGITGRPGSVGLPGPPGEPGRVTFRTGLPG
LPGEPGCTGPPGPPGDMGIKGDEAYVCTDCSYIPGIPGLPGSPGPQGQDGMPGREGTRGP
KGSPGSPGAPGFPGAQGPPGFRGDQGRKGSKGEPGYIYPEGPKGERGDPGARGDKGRKGS
SGFLGRPGPKGCKGSKGEEGLAGSKGDRGLPGLPGSLGLPGEMGLPGLPGYGPQGIRGFK
GSKGVPGPPGLPGEAGLKGETIRITPLPASPGPQGPDGLPGPPGVPGRVGARGQPGDSGH
LGPTGDTGFPGLGFPGNPGPKGDKGLAGGRGSPGCEGKIGDPGRAGNLGQPGEKGDPGMV
IPGEPGRLGSPGGHGIPGSKGDTGFPGLQGLPGRAGHDGDDGLRGDRGSPGVPGDPGFPG
KPAECLTGLPGLPGGQGATGPPGGRGSRGSKGKLGPPGLSIPGIYGEPGEPGLIGLQGNT
GLPGAKGQSGRPGISGTPGSRGEPGIIGLLGIPGHPGMIGRPGNPGSRGSSGFPGLKGRK
GFLGAKGEPGDKGFPGPSETLVGIGNKGEQGLKGVQGRMGLRGEKGDAGVQGPPGLDGSE
GIPGLPGVKGFMGLPGIPGGQGFPGAPGNKGDMGIPGPKGQKGSPGFPGPSGYPGPQGYG
GFPGDKGDPGYPSAGPPGEPGPKGDPGPPGALGSKGEKGSQGHPGHKGVPGPHGIRGETG
SAGIPGKLGPPGDTGVTGLQGRPGQQGITGPPGAVGHPGKNGLVGERGNQGQDGMPGHPG
VKGEPGAPGRGIPGLRGIPGRRGIKGDMGLPGFPGPPGMKGHQGDQGPIGPPGLVGLPGF
QGATGMAITGQKGNRGIAGADGRPGAPGFPGPPGLPTPSMKGSKGVRGADGIPGPTGPDG
DIGPPGPKGIEGRSGYPGARGDPGFLGFPGVKGEKGNQGPPGPQGAEGPRGPKGQRGPPG
VPGRIFSVPGSKGPPGLPGIPGTPGDQGIQGIPGLQGPKGVKGLPGSFGHPGQPGLPGPK
GDRGFPGQRGQPGLIGFPGLQGLPGSPGTITAGPTRRGFMFTRHSQSTKIPSCPHGTSQI
YVGYSLLFVQGNERAHGQDLGTAGSCLQRFTTMPFLFCNTNDVCSFASRNDYSYWLSTAA
VMPVDMAPISGRALEPHISRCVVCEGAAMVIAVHSQTTVVPACPEGWISLWKGFSFVMYT
SAGSEASGQALASPGSCLEEFRAIPFIECHGRGTCNYYTNSYSFWLASLNPRRMFRKPLP
QTLKAGELENIISRCQVCMKRPV
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgaggacggacggacggacggcggctgccggcggtgcccgaggcaggagacg
cgggggggagaggagaggggaggagaggggtggcccggccggccccgccccggccagccc
cggcccctgtccccaccccagggcgccgagagcgccgaggcgggtgcgaagcagcagccc
ccaggccaaaagccgcgggcgggcggggggcagagtccgagagccctgggccgagctccg
cgggacgccgcgcaggcagcgccgagcgcggggatggccggcaggggctgccccagccgt
ctggctccgctgctggtgctcgccctgctctggccgggccgcgccgccgcggcggctgag
agctgtgtatgcaaaggtaaaagtccctgcttttgtgatagcatgaaaggtagcaagggt
gaaaaaggctttcctggtgttccaggtccacctggtcatagggggtttcctggtccagaa
gggcctccagggccacagggaccaaagggttctccagggcttacgggcttagttggaccc
aaaggtatacgaggagtcccaggaatacctggattttcaggtcccccaggacttccaggt
gaaccgggaactgttggtcctcctgggcgctcgggtgttccaggatgcaatggcacaaag
ggtgatcgaggttttccaggtcctccaggtagaagaggtgctccaggcattctaggtatt
gctggtatcaaaggagagaaggggtgccctgcagatggatataaccaagggtatggtgca
aaaggtgatcctggattgccaggaatgcctggacttcagggtgcccagggtgctcaagga
tatcccggggagcttggaccacagggccctccaggagcttcaggcatgccagggagagca
ggacctcctggacctaagggtcttatgggactgaaagtaataggaaccaaaggaagaaag
ggtgacactgggttaactggaccccctggaccaccaggaaccgttattgtgacattaagt
ggaccagacaacacaacggacttgaaaggagagaaaggagaaaaaggatcaagaggactt
ccagggccaatggggttcacagggcctgttggtgattctcaaagtgaaaagggtgaccaa
ggagaacctggagcacagggtaaacctggaaaagaaggtgccccaggtccacctggctta
ccgggacaaaagggtgaacagggcagaccaggactgtctggcaggcaaggagctaagggg
atgaaaggaaacactggtccacctggagcttgtggtcgaacggagtattatgatagtgtt
gttggtgaaaaaggagatgaaggaccccctggacctccaggaccaaaaggtcaacgtggc
atgcctgggccacagggtcctcccggaggtgctggtagaccaggtgtgtcaagacctggt
ctgagaggtcccccaggatttcctgggccaaaaggaacaaaaggagagaaaggacaaact
ggcttgtgtattgtaggccctccaggactacctggtattactggcagacctggttctgtt
ggattaccaggtcctccaggagaaccaggtagagtaacatttagaacaggcctaccagga
cttcctggagagccagggtgtacaggacctccaggacctccaggagatatgggcattaaa
ggtgatgaagcttacgtgtgtactgattgcagctatattccgggaatacctggtcttcct
ggttctcctgggccacaaggccaggatggcatgcctggtagagaaggaacaagaggtcca
aaaggttctccaggttctccaggagcaccggggtttccaggagctcaaggacctccaggt
tttagaggagatcaaggccgtaaaggatcaaaaggtgagccaggatacatatatccagaa
gggccaaagggtgagcgaggggatccaggggccagaggagataaaggaagaaaaggttca
agtggatttctgggaagacctggccctaaaggatgcaagggctctaaaggtgaagaggga
ttggctggttcaaaaggagatagaggactacctggattgcctggcagtcttggtcttcct
ggagagatggggcttcctggactgccaggatatggaccacaaggaataagaggtttcaaa
ggctctaaaggagtacctggtccacctggattacctggagaagctggtctgaaaggagag
accattaggataactccattacctgcatcgccaggacctcaaggaccagatggtttacct
ggacccccaggagtgcctggtagggttggagcaagaggtcagccaggtgattcaggacat
ctaggaccaacaggtgacacaggctttccagggcttgggtttcctggaaacccaggtcca
aaaggagataaaggacttgcaggaggcagagggtcaccaggttgtgaaggaaagattgga
gatccaggccgagctggaaacctaggacaaccaggagaaaagggtgacccaggcatggtt
attcctggagagccaggtagactgggttcaccaggaggtcatggcattcctggttcaaaa
ggtgatactggatttccaggacttcaaggcctaccagggcgtgctggacatgatggtgat
gatggcctaagaggagatcgtggctcacctggagttcctggagatccaggttttccaggg
aaacctgctgaatgtcttactggactgccaggtttgccaggtggccagggagctacaggc
ccaccaggaggaagaggttcacgaggttcaaaaggaaagctaggtcctcctggcttgagt
atcccaggaatctatggagagcctggggaacctggattaataggtcttcagggaaatacg
ggattacctggtgccaagggacagtctggacggccaggaatctctggcacgccaggctca
aggggagagccaggtataataggcctgttaggaattcctggacaccctggcatgattgga
agaccaggcaacccgggtagcagaggttcttctggcttcccaggactgaagggaagaaaa
gggtttcttggagcaaaaggcgaaccaggtgataaaggttttcctggaccatctgagacc
ttggttggcattgggaataaaggagagcaaggcttaaaaggagttcaaggaagaatgggt
ctaagaggagaaaaaggtgatgctggtgtgcaaggtcccccaggtcttgatgggtctgaa
ggaatacctggtctaccaggtgtcaaaggatttatgggtcttccagggattcctggagga
caaggattcccaggtgcaccaggaaacaaaggggacatgggaattccaggtccaaaagga
cagaaaggatctccgggctttccaggaccatcaggttaccctggtccacagggctatggt
ggctttccaggtgacaaaggagaccctgggtacccatctgctgggcctccaggagagcct
ggtccaaagggagatccaggccccccaggagctttgggcagcaaaggagaaaaaggatcc
caaggtcatccaggacataaaggagtaccaggaccacatgggatcagaggcgaaactgga
agtgcaggaatcccagggaagcttggacctcctggagatactggtgttacaggactgcag
ggccgcccaggacaacagggcattacaggccctcctggtgctgttggacaccctggaaaa
aatggacttgttggcgaaagaggtaatcaaggtcaggatggtatgcctggtcacccagga
gtaaagggagaaccaggagcaccagggagaggaatccctggccttcgaggtattcctggt
cgtagaggaatcaaaggggacatgggactgcctggttttcctgggccaccaggtatgaaa
ggtcatcagggtgatcaaggacccattggacctcctggcttagtggggttacctggattt
caaggcgcaacaggcatggcaattactggccaaaaagggaatagaggtattgctggtgca
gatgggagaccaggtgctccaggttttccagggcctcctggtcttcccactcccagcatg
aaaggaagcaaaggtgttagaggggcagatggcataccagggccaacaggcccagacggt
gacattggtcctcctggtccaaaaggaatagaaggtcgatcaggttatcctggtgctaga
ggggaccctggatttcttggattcccaggtgtaaaaggagaaaagggtaatcaaggaccc
cctggaccacaaggtgcagaagggccaaggggaccaaagggccagcgtggtccacctgga
gtccctgggagaatattctctgtcccaggaagcaagggtcctcctggactgccaggaatc
ccaggaacaccaggtgatcaaggaattcaagggattcctggactacaaggacctaaagga
gtaaaaggtctaccgggaagttttggtcatccaggtcaaccaggactgcctggtccaaaa
ggagacaggggatttccaggacaaagaggacaacctggactgattggctttccaggtcta
caggggttacctggatcaccaggtactatcactgctggtccaacaagaagaggttttatg
tttacccggcatagtcagtcaacaaagattccttcatgcccacatgggacatcacagatt
tatgttggctattcgctgctttttgtacaaggaaatgaacgagcacatggacaagatctt
ggaacagctggtagctgcttgcagagatttaccaccatgccattcttattctgtaacacc
aatgatgtttgtagttttgcttctcgcaatgactattcatactggctgtcaactgcagca
gtaatgccagtagacatggcaccgatttctggtagggcactagagccccatataagcagg
tgtgttgtctgtgaaggagctgcaatggtaatagcagttcacagccaaacaactgtagtt
cctgcatgtccagaaggctggatatctctctggaagggtttttcttttgttatgtataca
agtgccggctcagaagcttctggccaagcattggcatctcctggatcttgtttggaagaa
tttcgagccatcccattcatagagtgccatggcagggggacgtgcaactactacacaaat
tcctatagtttctggttggcatcgttaaatccaagaagaatgttcaggaaacctctgcca
cagactttgaaagcaggagaactagaaaatatcatcagccgttgtcaggtctgcatgaag
agaccagtctaa
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