Aquila chrysaetos chrysaetos (golden eagle): 115347890
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Entry
115347890 CDS
T08023
Symbol
COL13A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
achc00536
]
115347890 (COL13A1)
Glycosaminoglycan binding proteins [BR:
achc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115347890 (COL13A1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
115347890
NCBI-ProteinID:
XP_040983019
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Position
11:complement(39752330..39843426)
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AA seq
779 aa
AA seq
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MLEEKSWKGVGEAAFDRGCVAPPRTGDGERCCRLPLLLGSGLPGVSLLSLVLSLLLYFRT
SDLQSRVSHLEADRPTQLPAWLSADQMETAILGRVDQLLDEKLKFHLPRHREVRDTHQRC
NCPAGPPGLTGRPGLPGDKGAMGIPGRPGLKGQPGEKGAPGEAGMSIIGPRGPPGQPGTR
GFPGFPGPIGLDGKPGHPGQKGEMGAAGPRGQPGPPGQKGEKGQCAEYPHRLLPLLNSVR
LAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPTGPAGPEGTPGQPGPIGPPGRAGEPGK
PGRDGKGLPGPPGPKGDPGIQGYPGRKGERGMPGLPGRHGTKGAPGLATAGLKGEPGTPG
EKGEKGRAGDPGLPGLPGTKGEKGNAENALVGGKGEPGPPGLPGPPGPKGEAGDIGRPGA
AGSRGEKGEPGSPGDQGPMGPRGPKGEPGKDDMMDYDGNISEALQEIRTLALMGPPGLPG
VAGPPGPPGQKGEIGLPGPPGHDGEKGPRGKPGEMGPPGPHGLPGKDGPPGIKGEPGHIG
VTGEKGDKGEPGQAGSPISGPPGPQGPPGPPGLQGLPGPKGEAGIDGMKGEKGAQGEKGD
RGPLGLPGTPGPIGVSGPAGPKGERGSKGDPGVVGPMGPAGLPGLQGLPGDKGIRGLRGF
KGEKGEPGLPGLDGLDAPCPLVWRTFPFLHASLLFVLGCYFLIPPNSCMPXRNTWQFLPY
LSPSYLPRAAVVRNRPFPSCYDSQLLSALLCGMRKNVAAMQIYLQLLQFFLCLHFENFQ
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggagaagagctggaaaggcgtcggcgaagcagcttttgacagggggtgcgtg
gctccccccaggaccggtgacggggagagatgctgccgcctccctctcctgctgggctcg
gggctgcctggtgtctccttgctctctctggtgctgagcctcctgctctactttcggacc
tccgatctgcagtcccgggtgtcccacttggaagcggacagacccacacagctccctgcc
tggctctcagcagaccaaatggagacagctattttgggaagagttgaccaactgcttgat
gagaaattaaagttccatttgccaagacatcgggaagttcgagacacacaccagcgatgc
aactgcccggcaggtccacctggccttacaggaagaccagggctcccgggagacaaaggc
gcaatggggatccctgggcggccgggactaaaagggcaacccggagagaagggtgcgcca
ggagaagcgggcatgtctatcatcgggccccgtggtccacccggacagcctggaacaaga
ggttttcctggattcccgggccctattggcttggacggcaaaccgggtcatcctggacag
aagggggagatgggtgctgcaggtcccaggggacaacccggacccccaggacaaaaagga
gaaaagggtcagtgtgcagagtacccgcacaggctgttgcctctcctcaattcagtgcgg
ctggctccacctccggtcataaagagacgcactttccagggtgaacaaggacaagcggga
atccaaggtcccccggggccccctggtccaccagggcccactggaccagctggacccgaa
ggaaccccaggacagcccgggccaattgggccacctggcagagcgggagaaccggggaag
cctggcagagatggaaagggcttacctgggcctcctggaccaaagggagaccctggaatt
cagggataccctggcagaaagggggagagaggcatgccagggctgccaggaagacatggc
actaagggcgctcctgggctggccaccgcaggactgaagggcgagcctgggactccagga
gaaaagggtgagaagggacgagctggtgaccctgggcttcctggactccctggcacgaag
ggagagaagggaaatgctgagaatgccttggtgggaggtaaaggagaacctggccctcca
ggtctgcctgggccccctggaccaaagggagaagctggtgacattggccggcctggtgct
gcagggtcacggggggaaaagggggaacctggttcaccgggagaccagggacccatgggc
ccaaggggccccaaaggagagcctgggaaggatgatatgatggactacgatggtaacatc
agcgaagctctccaggaaatacgaactttggccttgatgggacccccaggacttccgggt
gtggctggacctccagggccaccaggacagaagggtgaaattggcttgccaggtcctcca
ggccatgatggagaaaagggaccacgtggcaagcctggagaaatgggcccccctggccct
catggactgccagggaaggatggaccacctggaataaagggagagccaggccatattggg
gtcacaggagaaaagggtgataaaggagagccgggacaagccggctcaccgatatctggc
ccccctggaccccaaggcccaccaggacctccaggtcttcagggcctcccaggaccgaag
ggggaagcagggattgatggaatgaaaggagagaagggtgcccagggtgaaaaaggagac
agagggccactgggattacccggtactccaggaccaattggggtttcgggaccagcagga
ccaaaaggagaaaggggcagtaaaggagatcctggagttgtaggaccaatggggccagca
gggcttcctggtttacaaggtctacctggtgacaaaggaatccggggtctccgaggtttt
aaaggcgagaagggtgagccggggttacctgggctggacggcctggatgccccatgccca
ttggtatggcgtaccttccctttcctgcatgctagtttgctttttgtacttggttgttat
tttctgatacctccgaatagctgcatgcccnntagaaacacctggcaattccttccttac
ctatctccgtcctaccttcctcgcgctgctgttgtcagaaacaggcccttcccttcgtgc
tatgattcacagctgctgtcagcattactttgtggcatgaggaaaaacgtagcggcaatg
caaatttatttacaactgcttcaattcttcctttgccttcactttgagaactttcagtag
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