Aquila chrysaetos chrysaetos (golden eagle): 115348549
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Entry
115348549 CDS
T08023
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115348549 (COL17A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF5006
DUF4869
Motif
Other DBs
NCBI-GeneID:
115348549
NCBI-ProteinID:
XP_029887284
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Position
11:14101922..14144836
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AA seq
1516 aa
AA seq
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MDSVTKKTRQDGSEVSERLITETVTTRLTSLPPKGGSSSGLKTSSHTGGSGVEKRSYTHG
SSYVTSSGSGRLNSSSSSGYRQTQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSSP
EFPRKEFASASTRGRSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRSP
SSTLPIPKKAVVETKMVTESSQSVSGTYDTTILNTALPSYMWSSTLPAGSSLGGYHNSSS
LINAMSHSTGSVFGVPNNLAPSNHTLNAGLSTSSTVFGVQNNLSPSSSTLTQNATAASAA
YGMKNTSQSNTMASTGVSASAGGTVLSSQGDDILRKDCKFLLLEKENAPAKKEMELLIMT
KDSGKVFSASTTGLNGGSFVEDTLKKEKQGFSSSYATDTGLKSDANGGLKSVPTRDKATY
AEIRNGDVGGAIGSAPSWCPCGSCCSWWKWLLGLLLAWLLLLGLLFGLIALAEEVRKLKS
RVENLEKINGGLLTINQGNSKIEKDVSRVDFLHGISPSSTFPYENEESVWLMVKSRLNKE
IERGYFRGERGEPGAKGDMGMQGPRGERGLPGVPGIPGPNGHQGPEGPKGQKGSMGDPGM
EGPMGQRGREGLPGPRGEPGPPGFGEKGDRGGVGEPGPPGPPGPPGPAGLKGLMGSPGPQ
GPPGPPGLQGFRGEAGLPGAKGEKGAAGAPGPKGDQGEKGSRGMTGEQGSRGMPGPPGEP
GAKGPVGQAGRDGQPGEKGEPGLMGMPGARGPPGPSGDAGQPGLTGPQGPPGLPGNPGRP
GAKGEPGAPGKVISAEGSSTIALPGPPGPPGPAGPTGPPGVPGPVGPAGLPGQQGPRGEK
GSPGEAVIETIKTEVSSLTSQMLADLQGRAGPPGPPGPPGESVQGPPGPRGPPGEGLPGP
PGPPGRPGSSMSTSETFLTGPPGPPGPPGPKGDQGERGPRGFTGEPGEPGLSAFPSHGDR
VTMQGPPGVPGLPGPPGPKGDAGVPGAPGIPGASRGGSRQIQGPPGPPGPPGPPGPGGSS
SQEIQQYVTDYLKSDNVRHYLTGAQGPPGPPGPPGIITTADGMNLDYAELATRVMSYMTS
SSDGYQSLASSVSTTSILYQELLDMLQREEIRQYLIGPQGPPGPPGPGGDGMSLSLDYDE
LTRRFISYVTSSGMSIGLPGPPGPPGTPGISYSDLTAYLRNSEFSGLVGPPGPAGPQGPP
GIPGSPGTSLEDVSAYLQSVGYSLSGVQGPPGPPGPPGPPGFSGTGLLSYADITHSDEFR
SELIQYLKSDEVRSYISGPPGPPGPRGPPGPKGDSGLVAGSMSSSYQGLRTSERLHGGSL
GAEGSHGGSLGTGSSYGSSVSSMSSYSASIGSDGSYDTSMGSDGSFAGLLTEDESHRRSA
GSSRSYSNSFSGSLDYNELALRVSESLQSQGILQDLMSYTAQGPAGPPGPPGPPGISRVF
AAYGNVTEDLMDFFRTYGTIQGPPGEKGERGYPGPKGDPGPMGPPGRQGHRGPKGEKGEK
GEQVYVGRRKRRSVGV
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtaacaaagaaaacgaggcaagatggatcagaagtttctgaaagacttatt
acagagactgtaaccacaagactgacgtccttgccgcccaaaggagggagcagcagtggg
ctcaaaacatcatcccacactggagggagcggagtggaaaagaggtcttacacccatggc
agcagctatgtaacttcaagtggaagtggtaggttgaattcatcatcatcctctggctac
agacaaacccagtctcccagctctactctcaccaaatcacctggctcaacatttgaaaga
aaaacctatgtcaaccgccatgcaacatatgaagggagctccagtgccaactcttctccc
gagtttcccagaaaagagtttgcatctgcctccacgagagggagaagccaaagtcgagag
agtgaaatacgagtacgactgcagagtgcatctccctctggcagatggacagagttggat
gatgtgaaacgtttgctgaaaggaagtcgatcagccagctgcagccctactcgatcacca
tcaagtacgctcccgataccgaaaaaggctgtggtggagacaaagatggttactgagagc
tctcagtcagtgtcggggacgtatgatacaaccatactgaataccgccctcccttcatac
atgtggtcctccactttgcctgctgggtcttcccttggtggataccataacagctcttcc
ttgatcaatgctatgtctcactctacaggatcagtttttggtgttccaaataacctggct
cccagcaatcatactctgaacgcaggcctgagcacttcctctacagtgtttggagttcaa
aacaacctgtctccaagctcttcaaccctgacccagaatgctactgcagcctccgcagca
tatgggatgaagaacacttctcagagtaacaccatggcaagtactggtgtgtctgcctca
gcagggggaacggttttgagctcccagggagatgacattctacgcaaagactgcaagttc
ctgctgctggagaaggagaatgccccagcaaagaaggagatggagctcttgatcatgaca
aaggacagtggcaaagtctttagtgcctctaccactgggcttaatggaggatcctttgta
gaagacaccttgaagaaagagaagcaggggttttcttcctcttatgctacagatactggc
ctaaaatcagatgcaaatggaggactgaaatctgtgccaacaagggacaaagcaacttat
gcagaaatacgaaatggtgatgtggggggtgcaattggatcagcaccatcctggtgtccc
tgtggttcctgctgtagctggtggaaatggctcctgggtctgcttctggcctggttgctt
ctcctcggactgctttttggactcattgctctggcggaagaagtgagaaagctgaaatct
cgtgtggaaaacctcgaaaaaatcaatggtggcctcctgacaattaaccaagggaattca
aaaatagaaaaggatgtttcaagagtagacttccttcatggtatttcgccctcctcaacc
ttcccttatgaaaatgaagagtcagtctggttgatggtgaagagcagactgaacaaggaa
atagaacgaggctacttccgaggggagagaggggaacctggtgcgaaaggtgacatggga
atgcaaggtcccagaggagagcgaggacttcctggtgtcccaggcattcctggtccaaat
gggcaccaaggaccagaaggaccaaaaggacagaaaggcagcatgggtgatcctggcatg
gaaggtcccatgggacaaagaggtcgagaagggctaccagggcctcgaggggagcctgga
ccacctggatttggagaaaaaggggacagaggtggtgttggtgagccaggtcctccaggg
ccacctggtcctccaggtcctgctggccttaaaggtctgatgggttctccaggcccacaa
ggtcctccaggtcctcccggcctacaaggatttagaggagaagcaggtctcccaggtgct
aaaggtgagaaaggagccgctggagcccctggacccaaaggtgatcagggtgagaagggt
tctcgtggaatgacaggtgaacaaggctcaagaggaatgcctggtcctccaggagagcca
ggggctaaaggacctgtaggacaagctggccgtgatggacagccaggtgaaaaaggtgaa
ccaggtcttatgggaatgccaggagcccgaggccccccaggaccctctggagatgcagga
cagccaggtctcacaggaccccaaggaccaccaggacttccaggcaatccaggccggcca
ggggctaaaggagaacctggagctccaggaaaagtcattagtgctgagggctcgtcaact
attgctctgccaggcccaccaggtcccccaggcccagccggccccactggacccccaggt
gttccaggtcctgttggaccagctggtctccctggacaacaaggtccacggggtgagaag
ggatccccaggtgaagctgtgatagaaactatcaaaacagaagtctcatcattaacatct
caaatgctggcagatttacaagggcgagcaggaccgccaggtccccctggaccaccaggt
gaatctgtgcagggtcctcctggacctcgtggccccccaggagaaggattgccaggacct
ccaggcccaccagggagaccaggatcttccatgtccacctcagaaacattcctcacaggc
ccaccaggtccaccaggcccaccaggcccgaagggagaccaaggcgagcgaggtccacga
ggattcacgggagaacccggtgagcctggcctttcagcattcccctcccacggtgacaga
gtcaccatgcagggacctccaggagttccaggcctgccaggcccacctgggcccaaaggt
gatgcaggtgtcccaggcgctcctggcatcccaggagcatctcgaggtggatccagacag
attcagggacccccaggacctcctgggccaccgggtcctcctggcccaggtggaagttca
tctcaagagattcagcagtatgtcactgactacctgaagagtgacaacgtaaggcattat
ttgactggtgcccaaggcccaccaggccctccaggcccacctggaatcatcaccactgca
gatgggatgaacttggattatgcggagctggctacccgtgttatgagctatatgacaagc
tcttcagatggctatcagtcacttgccagttcggtatcaactacatccattttgtaccaa
gaacttctggacatgctgcagagagaagaaattcgtcagtatctaattggacctcagggc
ccaccgggacctcctggaccagggggagatggcatgtctctgtcactggattatgatgag
ctgaccagacggtttattagctacgtgacaagttctgggatgagcattgggctccctgga
ccacctgggcctccagggacacctggtatatcttacagtgacctgacagcatacctgcga
aactctgaattcagtggtcttgttgggccccctggtcctgcagggccccaaggacctcca
gggatccctggatcaccaggcacctctctggaggacgtctctgcttacctacaaagtgtg
ggatactccctctctggagtccaaggcccacctggccctcctggccctccaggaccacca
ggcttctcaggaaccggcctcctgtcctatgctgacatcacccacagtgacgagttcagg
agcgagctgatccagtacctgaagagtgatgaagttcgaagctacatctcagggccgcct
ggcccccctgggccacggggaccaccaggacccaaaggagatagcggcttggtggctggg
tctatgtcttcatcttaccaagggttacggacttccgagcggttgcatggaggatccctt
ggtgctgagggatcccatggaggttcactgggcacaggcagctcatatggtagctccgtt
agcagcatgtcatcttacagtgcctcaataggcagtgatggctcttatgatacctccatg
ggcagtgatgggtctttcgctgggctgctgacagaggatgaatcacacaggagatcagca
ggttcaagcagatcctacagcaactccttcagtggttccctggattacaatgagctggca
ctccgtgtgtcggagagcctacagagccaaggtattctccaggacctgatgtcgtacact
gcacagggacccgcgggtcccccaggccctcctggtccccctggcatcagcagggtcttt
gcagcctatggcaatgtcaccgaggacctcatggacttctttagaacatatggtaccatc
caggggccacccggtgaaaagggggagaggggttatcctggacccaaaggtgaccctgga
ccaatgggcccaccaggacgccaggggcacaggggaccaaaaggagagaaaggagagaaa
ggtgaacaagtgtatgttggcagaagaaaaagaagaagtgttggggtttaa
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integrated database retrieval system
