Aquila chrysaetos chrysaetos (golden eagle): 115349181
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Entry
115349181 CDS
T08023
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
achc03000
]
115349181 (RC3H1)
04121 Ubiquitin system [BR:
achc04121
]
115349181 (RC3H1)
Transcription factors [BR:
achc03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
115349181 (RC3H1)
Ubiquitin system [BR:
achc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115349181 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
115349181
NCBI-ProteinID:
XP_029888933
Ensembl:
ENSACCG00020008174
LinkDB
All DBs
Position
12:11512027..11579349
Genome browser
AA seq
1130 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE
GGVDLPNRKTSALPNGIVSTGSTVTQLISRGTDSGYETALKPGKMDHLSSSAPGSPPDLL
ESVPKSSISALPVNPHPVPTRAPTDLPSVSVTKQLQMVPRGSQLYNTQQADMFYQDPRGA
APPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSPQYTQPQQY
PPMGQPIYPPHYDSRRVYTPVQPYQREEIVRGSPVPIEIPQAAVPSYVPESRDRYQQTEG
YCPVAPHLSQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSE
EVFVFVQYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANV
DSKAMRDQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQG
ATTKSIISDYNPYGTHGGWGGSPYSPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAERE
QQLRMELQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGMISSEQ
LSLELHQVEREIGKRTRELSMESQPSLDIKTKLGTTKQTENGQLEPQSKVPAEDLALTFS
SDVPNGSALTQENIGLLSNKAASLSLSEDPEGGGDNHDSQRAGVTPTSAP
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccgatttgcacacagact
ttcgacgaaacaatccggaagcccatcagtttgggttgcggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgcccttttgaccagaccactatcaatacagac
attgaactccttcctgtgaactcagccttgctgcagctagtgggtgctcaggttcctgag
cagcagccaattactttatgtagtggagctgaagataccaagcattatgaggagggcaag
aaatgtgtggaagaattagcgttgtacctcaaaccactcagcagcgcgagaggtgtgggt
cttaacagtactactcagagtgtgctaagtcgtcccatgcaaaggaaacttgtgacatta
gttcattgccagctagtggaggaagaagggcggatcagagccatgcgtgcagcacggtcg
cttggtgaaagaacagtcacagagctcattcttcagcatcaaaatcctcagcaactctct
tccaacctctgggctgcagtgagagctagagggtgccagttccttggaccagcaatgcaa
gaggaggctttaaagctggttctactggcgctggaagatggatctgctttgtcacgaaag
gttttggttctttttgtggttcagaggctggagccgcgatttcctcaggcttctaaaact
agcattgggcatgttgtccagcttctttacagagcctcatgcttcaaggtgacaaagcga
gatgaggattcctccctcatgcaactgaaggaggaatttcggacttacgaagctttgaga
agggaacatgattcccagatagttcaaatagctatggaagcaggtttacgcattgcacca
gatcagtggtcctcactgttatacggagaccagtctcacaaatcccacatgcagtctatc
attgacaagttgcagaccccagcctcatttgcacagagtgttcaggaattaactattgct
cttcagaggactggagatccagctaacctgaatcgtcttcgacctcacttagagctgctg
gcaaatattgatcccagtccagatgctccacctccgacgtgggaacaactggaaaatgga
ctagttgctgtgaggactgtggttcatggcttagttgattatatccagaatcacagcaag
aaaggaacagatcagcaacagcctcctcagcacagcaagtacaagacatacatgtgccga
gacatgaaacagagaggaggatgcccccgaggggccagctgcacctttgcacattcacag
gaggagctagaaaaattccgtaaaatgaacaagcgtctggttcccagaagacccctgagt
gcctccctgggccagctaaatgaggtgggcctgccttcaggagctatcctctcggaggaa
gggggagtggacttgcccaataggaaaacgtctgctctgccaaatggaattgtgtcaaca
ggcagcacagtgacgcaacttatttctcgagggactgactccggttatgaaactgctctg
aagccagggaagatggaccatctgagtagcagtgcccctggatcccctcctgacttgctg
gaatctgtccccaagagctctatttctgccttaccagtgaaccctcatcccgtgcccact
cgggcaccaacagatctgccttcagtgtctgtcaccaagcagttgcaaatggtaccacga
gggtctcagttgtataatactcagcaagcagatatgttttatcaagatcctagaggagct
gccccaccatttgaaccagcaccctaccaacaaggagtttactatcccactcagtccatg
tctcggtttgtccgacctcctccatcagctcctgaacctggtccaccttatttagaccat
tacccaccctaccttcaggatcgtgtggtgagcccacagtacacgcagccacagcagtat
cctcctatgggacaacccatatacccaccacactatgacagccgtcgtgtatatacccct
gtccagccatatcagcgagaggagattgtccgaggaagccctgtacccattgaaattcca
caagctgctgtaccttcctatgtacctgaatccagagacagataccagcaaacagaaggt
tattgcccagtggctccacatctcagtcagatcagaccttcatgccacaggcctcatccc
agcctggatgaacttcaccggcgaaggaaagagatcatggcccagctagaagagaggaag
gtgatttctccacctccttttgcaccatcaccaaccttgcctcatccatttcattcagag
gaggtttttgtttttgtacagtacttggatgaagacctgaaggtggctgggaaatacaaa
ggaaatgactacagccagtactctccctggtcctgtgacaccatcggctcctacattgga
accaaagatgcaaaacccaaagatgttgtggcagcaaggagtgtggagatggcgaatgta
gatagtaaagccatgcgtgaccagcgattagacatgcagcgaagagcagcagagactggt
gatgatgacctcattccatttggagaccgaccaactgtgtcaagatttggggctatctcc
cgtacttccaaagcaatgtaccagaattctggtcccatgcaggccatggcggttcaggga
gctaccaccaaatcaatcatttcagactacaatccttatggaactcacggtggctgggga
ggctctccatattctcctcatcaaaatataccttctcagggacgtttcaatgacagggag
agactgtccatgtcagatgtggctggtcatgggaaacagttgccctcagctgaacgagag
cagcaactgcgcatggagctgcagcaagtagaccatcagattagccagcagacacaaatg
cgaggactagaggctgttagtaacaggctgctgttgcagagggaggcgactaccctggca
ggccaaccacagcccccacccccacctcccaagtggcctgggatgatctcaagtgaacag
ctgagcttggagctacaccaggtggaaagggaaattgggaagagaacccgtgagctgagc
atggagagccagccctcactggatataaaaaccaaactgggcaccactaaacagacagaa
aatggacaattagaaccgcaaagcaaggttccagctgaggacctcgcactgacattcagc
agtgatgttccaaatggatcagccttgacacaagagaacattggcctcctgtcaaacaag
gcggcatctctcagcctgtcagaggacccagagggaggaggagacaaccacgactcccag
agagcgggagttacacccacatctgctccatga
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integrated database retrieval system
