Aquila chrysaetos chrysaetos (golden eagle): 115349418
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Entry
115349418 CDS
T08023
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115349418 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
achc04515
]
115349418 (VCAM1)
04090 CD molecules [BR:
achc04090
]
115349418 (VCAM1)
04091 Lectins [BR:
achc04091
]
115349418 (VCAM1)
Cell adhesion molecules [BR:
achc04515
]
Immunoglobulin superfamily
VCAM
115349418 (VCAM1)
CD molecules [BR:
achc04090
]
Proteins
115349418 (VCAM1)
Lectins [BR:
achc04091
]
I-type lectins (Siglecs)
115349418 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
ICAM_N
C2-set
Ig_C17orf99
Ig_6
DUF2808
Ig_4
C1-set
Herpes_gE_N
ICAM1_3_5_D2
Syndecan
Motif
Other DBs
NCBI-GeneID:
115349418
NCBI-ProteinID:
XP_029889567
Ensembl:
ENSACCG00020009540
UniProt:
A0A663ENG2
LinkDB
All DBs
Position
12:21362839..21371248
Genome browser
AA seq
626 aa
AA seq
DB search
MGRTSQAVLLILYVFMTVKAFEMEIIPANRIVAQIGETLILTCNTTGCASPSFSWRTQMD
NPLGGTVNNHRTYSTLTMNPVSIVNSHDYLCTVFCGEKEKKEKSIKVELYSFPSDPIIEI
RPSLVAGEPVTVICKIPDVYPSDHLEVLLKKEGYTLHEENFYEDDSTNTETKTVTYSFNP
TAEDIEKEITCVAKLPIAYMDFEPKERVTSQKLNTNSGPKNTIITASPGNSPMEGDPLKL
TCVTESNPPTQIVWRKHLADESIQHLIENNVLSIPHTRFTDSGLYICEVINLVTNKTEKA
TVDIVIQGAPNITELSIEPSITVQEGENVSIQCSAESNPPPKIILRRKSDSADMGSYSEG
RILLPSVTFLNGGDYECIAENKFGKSKSEITLNVEYGPKNTMISVIPATAVKEGETVIMK
CTSSGNPAPVISWKKKTATGELEKMFKDATLPIQNVKSQDMGLYECEAHNQFGREEKAVR
LLVQVPPQNITVLVYPSENVKEGENVTITCSTYSNPPSQMVLKKVHQEKEIILSSVNGTF
ILYNVTKNDAGRYLLDVFNEAGNNVKVIEISVVGRLEKTDQMIPLIIAFSCVTAVAVPVV
AILIYVSRKAKINGSYSLVKAFGLKV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaacaagccaagctgtgctgctaattttgtatgtgtttatgacagttaaagca
tttgaaatggagattatacctgctaacagaattgttgcacagattggagaaacactcata
ctcacatgcaatactactggctgtgcatcaccaagtttttcctggagaacccagatggac
aacccccttggaggaacagtgaacaaccataggacatactctaccttgactatgaatcca
gttagcattgtgaattctcatgattatctgtgtactgtcttctgtggtgagaaagagaaa
aaagagaagagtatcaaagttgaactttactctttccccagcgatcctatcattgagatc
aggccatccttagttgctggagaaccagtcactgtcatctgtaaaattcctgatgtgtat
ccttctgatcacctggaagtactcctaaagaaagagggatatactcttcatgaggaaaat
ttttatgaagatgacagcacaaatacagagaccaaaactgtgacttattcttttaatccc
acggctgaagatattgagaaagagattacctgtgtggccaagttaccaattgcttatatg
gactttgaacctaaagaaagagtaacttctcagaaactgaatacaaactctggccccaaa
aatactatcattactgcatctccaggcaactcgccaatggaaggagaccctctaaaactc
acttgtgtgactgagagtaatccaccaacacaaatagtttggagaaaacatttggctgat
gaaagcattcagcatctgatagaaaacaatgtgctttctattccccatacccgtttcact
gattcaggactgtacatctgtgaagtaattaatctggtaactaataaaacagagaaagca
actgtggacattgtcatacaaggtgctccaaacattacagaactctctattgagccttct
ataacagttcaagaaggagaaaatgtttccatacaatgttctgctgagagtaaccctcct
cccaagattattttaaggagaaaatctgacagtgcagacatggggtcttacagtgaggga
agaattcttcttccatctgtgacattcctaaatggaggagactacgaatgtatagcagaa
aacaagtttgggaaaagtaaaagtgaaataacacttaatgtagaatatggaccaaagaat
acaatgatctctgttatccctgctactgctgttaaagaaggagaaactgtgataatgaaa
tgtactagttctggtaatccggctccagtgatctcttggaagaaaaagacggccactggg
gagctggagaaaatgtttaaagatgccactttacctatacagaatgtaaaaagtcaagat
atggggctttatgaatgtgaagctcataaccaatttggcagagaagaaaaagctgtcaga
ttacttgttcaagttcctccccaaaatattactgtgttagtatatccatcagaaaatgtt
aaagaaggagaaaatgtcactattacatgtagcacgtacagtaacccaccatcacagatg
gtcctgaaaaaagtccatcaggagaaagaaattattctgtcatcagtgaatggaaccttt
atactctacaatgtcaccaaaaatgatgcaggcagatatttgcttgacgttttcaatgag
gctggaaacaacgtcaaagtgattgagatatctgttgtaggaagattggaaaaaacagat
caaatgataccactgataattgcattctcctgtgtaacagcagtagcagtacctgtagtt
gcaattttgatctacgtgtcaagaaaagcaaagataaatggatcctacagtcttgtaaaa
gcattcgggctgaaagtgtga
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