Aquila chrysaetos chrysaetos (golden eagle): 115350854
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Entry
115350854 CDS
T08023
Symbol
COL2A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(II) chain
KO
K19719
collagen type II alpha
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc04510
Focal adhesion
achc04512
ECM-receptor interaction
achc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115350854 (COL2A1)
04518 Integrin signaling
115350854 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115350854 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
achc00536
]
115350854 (COL2A1)
Glycosaminoglycan binding proteins [BR:
achc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115350854 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
115350854
NCBI-ProteinID:
XP_029892750
Ensembl:
ENSACCG00020010155
LinkDB
All DBs
Position
15:complement(30134636..30153156)
Genome browser
AA seq
1485 aa
AA seq
DB search
MPGRRPLRLAAGLAILFLAAVAAQDRDLPEAGSCLQDGQSYSDKDVWKPEPCRICVCDTG
TVLCDEIICEELRDCPSPEIPFGECCPICPTDQPSGQPGPKGQKGEPGDIKDVVGPRGPP
GPQGPAGEQGQRGDRGEKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQ
MAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPSGAPGPQGFQGNPGEPGEPGAAGPMGPR
GPPGPPGKPGDDGETGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEA
GAPGAKGESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPA
GAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKGSA
GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAP
GPAGEEGKRGARGEPGAAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPK
GATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQPGVM
GFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPS
GFQGLPGPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLP
GTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKD
GARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGAD
GQPGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAA
GRVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGEPGED
GPAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPV
GPPGLTGPAGEPGREGNPGSDGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPT
GKQGDRGETGAQGPMGPSGPAGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLP
GPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPP
GNPGPPGPPGPPGTGIDMSAFAGLGQPEKGPDPIRYMRADEAAGSLRQHDVEVDATLKSL
NNQIESIRSPEGSKKNPARTCRDIKLCHPEWKSGDYWIDPNQGCTLDAIKVFCNMETGET
CVYPNPSSIPKKNWWTSKTKDKKHIWFAETINGGFHFSYGDEDLAPNTANIQMTFLRLLS
TEGSQNVTYHCKNSIAYMDEETGNLKKAILIQGSNDVEIRAEGNSRFTYSVLEDGCTKHT
GKWGKTVIEYRSQKTSRLPIVDIAPMDIGGADQEFGVDIGPVCFL
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgcccggccgccgcccgctccgcctcgccgccggcctcgccatcctcttcctcgccgcc
gtcgccgcgcaggaccgagacctccccgaagcaggcagctgcctgcaggacgggcagagc
tatagcgataaggacgtatggaagccggagccgtgccgtatctgcgtgtgcgacacgggg
accgtcctctgcgacgagatcatctgcgaggagctgcgggattgtcccagccccgaaata
cccttcggagagtgctgccccatatgtcccactgaccaacccagcgggcaacctggcccc
aaggggcagaagggcgaacccggtgacattaaagatgtcgtaggaccccgagggcctccg
ggaccgcagggcccggcaggtgagcagggacaacgaggggaccgtggcgagaagggggaa
aagggtgctcccggcccccggggcagggatggagaacccggcacccctggaaatcctggc
ccccctggcccccctggacctcccggcccccccggccttggtgggaacttcgcagctcag
atggcaggcggcttcgacgagaaggctggaggcgcgcagctgggcgtcatgcagggaccc
atgggccccatgggaccccgtggcccccccggaccctccggcgctcctggtccccaagga
tttcaaggcaaccccggcgagcccggcgagcccggcgctgctggtccgatgggtccccgg
ggaccaccgggacctcctgggaaacccggtgatgacggtgaaacaggaaaacccggcaaa
tctggcgagcgtggcccccctggcccccagggtgctcgtggcttccctgggacgcccggt
ctccctggagtgaaaggccaccggggctaccctggattggacggtgccaaaggagaggca
ggggctcctggagccaagggcgaatccggctcacctggtgagaacggctcccctggcccc
atgggtccccgtgggctgcccggagagagaggacgtcccggcccctccggcgctgcgggt
gctcgtggcaacgatggtctccccggcccggctggaccccctggacctgtcggcccagcc
ggagcccccggcttccccggtgcccccggctcaaagggtgaagctggtcccaccggcgca
cgaggtcccgagggtgcccagggtccccgtggtgaatccggcacccccgggtctcctggc
cctgccggtgcccccggtaacccaggtactgatggcatccccggcgcgaagggctcggcg
ggtgccccgggcatcgctggcgctccaggcttccccggcccccgcggcccacccggaccc
cagggtgccaccggcccgctgggacccaagggacagacgggagaacccggcatcgcgggc
ttcaaaggcgaacagggaccgaagggtgagacgggacccgcaggaccccaaggtgccccc
gggccggctggcgaggaaggcaagagaggagcccgcggtgaacctggtgctgccggccct
gtgggaccacctggagagaggggtgcccccggcaatcgcggcttccccgggcaggatggg
ctcgctggacccaagggtgctccgggcgagcgcggtcccgccggcctcgcgggtcccaag
ggagccaccggcgatcccgggcgccccggagagcccgggctgcccggagccaggggtctc
accggccgcccaggtgacgctggtcctcaaggcaaagtcggcccaaccggtgctcctggc
gaggacggtcgccccggcccccccggcccgcagggtgctcgtggccagcctggcgtgatg
ggtttccccggtcccaaaggtgctaacggtgagcctggaaaagccggtgagaaaggcctc
cccggtgccccagggctgcggggtcttcctggcaaggacggtgagacgggagctgccggc
cccccaggacctgccggtcccgcgggtgagagaggagagcaaggagcccccggtccctct
ggcttccaggggctgcccgggccaccaggtccccccggagagagcggcaaacccggagat
cagggtgttcccggagaagccggtgcccccggtcttgtcggtcccagaggcgaacgcggc
ttccccggtgaacgtggctctcctggtgcgcaagggctgcaaggtcctcgtgggctcccc
ggcacaccgggcaccgacggacccaagggtgcaaccggacccgccggccccaatggtgcc
cagggtcccccagggcttcagggaatgcccggtgagagaggagcagccggcatcgccggt
cccaagggagaccggggagacgtaggagagaagggccccgagggagcccctggaaaggac
ggcgcacgcggtctgacgggtcccatcggtccccccggccccgctggccccaatggcgag
aagggtgaatctggccctcctggtccatctggtgctgctggtgcccgtggtgcccctggc
gagcgcggtgaacccggtgcccctggtcccgccggatttgctggccccccgggtgccgac
gggcaacccggtgccaaaggcgaacaaggagagcccgggcagaagggtgacgccggtgct
cccggtccccaaggtccctctggcgcacctggcccgcagggtccaactggtgttactggt
cccaaaggagcccggggtgctcagggcccccctggagccactggattccccggcgccgcc
ggccgtgtgggaccacccggccctaatggtaacccaggcccccccggtccccccggctct
gctggcaaagatggtcccaagggtgctcgtggtgatgccggtcccccgggccgtgctggt
gaccctggcctccaaggccccgccggcccccctggcgagaaaggtgaacccggcgaggac
ggccccgcgggtcctgacggtccccccggtccccaaggtttggcaggacagcgcggcatc
gtcggtcttcctgggcagcgtggcgagagaggcttccccgggctgccgggaccatcgggc
gaacctgggaaacaaggagcacccggctctgcaggcgaccgcggcccccccggccctgtg
ggtccccccggtctgacgggtcctgccggcgaacctgggcgcgagggtaaccctggctct
gatggacccccgggcagggacggtgcagctggcgtgaagggtgatcgtggtgagaccggt
cctgtaggtgcccccggcgctcccggtgcccccggcgctcctggccccgttggtcccacc
ggcaaacaaggagacagaggcgagacgggtgcacaaggtcccatgggtccctctggtcct
gctggcgctcgagggatgccgggtccccaagggcctcgtggtgacaagggtgagacggga
gaggctggagagagagggctgaagggccaccgcggcttcaccgggctgcagggtcttccc
ggaccacccggtccttctggagaccaaggtgctgctggtcctgcgggtccctccggtccc
aggggtccccccggccccgtcggcccctctggcaaagacggctccaacggcatgcccggc
cccatcggtccccccggcccccgcggacgaagtggcgaaccaggtcctgcgggtcctccc
ggaaacccaggtccccccggtcctcctggcccccccggcactggcattgacatgtcagct
tttgctggcctgggtcagccggagaagggtcccgatcccatccgctacatgcgggcggac
gaggctgccggcagcctgcggcagcacgatgtcgaggtggacgccacgctcaagtccctc
aacaaccagatcgagagcatccgcagccccgagggctccaagaagaacccggccaggacc
tgccgtgacatcaagctttgccatcccgagtggaagagcggagactactggatcgacccg
aaccagggctgcaccttggacgccatcaaagttttctgtaacatggagacgggcgagacc
tgtgtctaccccaaccccagcagcatccccaagaagaactggtggaccagcaagaccaaa
gacaagaagcacatctggttcgcagagaccattaatggcggtttccactttagctacggc
gatgaagacctggctcccaacactgccaacatccagatgaccttcctccgtctcctgtcc
accgaaggctcccagaacgtcacttaccactgcaagaacagcatcgcctacatggacgag
gagacaggcaacctgaagaaagccatcctcatccaggggtccaacgacgtagagatcaga
gctgagggcaacagcaggttcacgtacagcgtcttggaggatggttgcacgaaacacact
ggcaaatggggcaagacagtcattgagtaccgatcgcagaagacctcgcgcctgcccatt
gtagatattgcacctatggacattggtggagctgatcaggagtttggcgtggatattggc
ccagtctgcttcttgtaa
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