Aquila chrysaetos chrysaetos (golden eagle): 115351263
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Entry
115351263 CDS
T08023
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc04512
ECM-receptor interaction
achc04514
Cell adhesion molecule (CAM) interaction
achc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115351263 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
115351263 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115351263 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
achc04131
]
115351263 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
achc04090
]
115351263 (SDC1)
00535 Proteoglycans [BR:
achc00535
]
115351263 (SDC1)
Membrane trafficking [BR:
achc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
115351263 (SDC1)
CD molecules [BR:
achc04090
]
Proteins
115351263 (SDC1)
Proteoglycans [BR:
achc00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
115351263 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
115351263
NCBI-ProteinID:
XP_029893700
Ensembl:
ENSACCG00020010958
UniProt:
A0A663EW28
LinkDB
All DBs
Position
15:10777014..10803541
Genome browser
AA seq
310 aa
AA seq
DB search
MMIRVVAVGLVALCFQAAVPQTTNLNLPPEDLDSSGDDDDAFSGSGAGPLTDQSHTWRIP
GEPTNSSLLATPMDFNEQLFRGTESRTEKEVISPSATSNVVTEEPVVAVKDEVSILGSPD
EKPTNDAVTATVRSPTTHLPSVVHVTPSEASGTVHELKPKIPSSEMPDTEDVPEPHSTIH
PEGDITATPTTTAPKDVVPTHEEVSEDGSGDPGDFILTKDEDLVPTQNSEVPADSGRNAK
AAGASGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQ
KPHKQEEFYA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatgatacgcgtggtggccgtggggctggtggccctttgcttccaggctgctgtcccg
caaactacaaatctgaaccttcctcctgaagaccttgattcatctggtgatgatgacgat
gcgttctcaggttcaggtgcaggtcccctgactgaccagtctcacacctggagaatccca
ggagaaccaactaattcctcattactggcaacaccaatggatttcaacgaacagctgttt
cgcgggactgagagccgaactgaaaaggaagtaatatctccttctgcgaccagtaatgta
gtgacagaggagccagtggtagctgtgaaggacgaagtgtccatcctgggctctcctgat
gagaaaccaacaaacgatgcagttacagcaacagtgagaagccccactactcacttgcct
tcagtggttcatgtaactccttcagaagcctcaggcacggtccacgagctcaaacctaaa
atccctagctctgagatgccagacactgaagacgtgcctgagccccactctaccatccat
cctgagggagacatcactgccacccccacgacgacagctcccaaggatgttgttcctaca
catgaggaggtttctgaggatggctccggagacccgggagacttcatcttgactaaagat
gaggatttggtccccacccagaactcagaagtgccagctgactctgggaggaatgccaaa
gcagcaggagcctcgggaattatggacagaaaagaagttcttggaggtgttattgctgga
ggactagtaggcttggtgtttgcagtgtttctagttgcatttatgctgtacagaatgaag
aaaaaagacgaaggcagctattcactggatgaaccaaaacagtctaatggaggataccaa
aaaccacacaaacaagaagaattctatgcataa
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