Aspergillus chevalieri: ACHE_20682S
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Entry
ACHE_20682S CDS
T08080
Symbol
SKI6
Name
(RefSeq) exosome non-catalytic core component
KO
K11600
exosome complex component RRP41
Organism
ache
Aspergillus chevalieri
Pathway
ache03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ache00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACHE_20682S (SKI6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ache03019
]
ACHE_20682S (SKI6)
Messenger RNA biogenesis [BR:
ache03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ACHE_20682S (SKI6)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
ACHE_20682S (SKI6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
66979583
NCBI-ProteinID:
XP_043133746
UniProt:
A0A7R7VK00
LinkDB
All DBs
Position
2:join(1953669..1953970,1954041..1954548)
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AA seq
269 aa
AA seq
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MPLDTSTTYPLTKLRLDGRRWNELRLLQAQISTNPASSGSSYLCMGNTAIMCSVHGPAEG
KRGDGSAGGAAGSAEAIVEVDVNIAGFAGVDRKRRVGGSDRQSSRIATTLRAAFQSHLHT
YLYPHSTISIHVSVLSSDGSLLAAAINACTLALVDAGIPMPGLLCGCTAGMSGSASTPRD
PSEDSLDPLLDLSLPEEQELPFLTVGTTTAVPVGEMALDEADAEEEEMKVSMLNMDSKVH
CTYIETMLAVGIDGCKQIREVLDGVIKGR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgacacatcaacaacataccccctcaccaaactccgcctcgacggccgccgc
tggaacgagctgcgtctcctgcaagcccaaatctccaccaacccagccagctccggctcc
tcgtacctatgcatgggcaacacggcgatcatgtgctccgtccacgggccggccgaggga
aagcgaggagatggctctgcaggtggtgcggcgggttcagcggaggcgattgttgaggtt
gatgtgaatattgccgggtttgcaggcgtggatcgcaagaggagggttgggggaagtgat
cgacaatcctcacgcatcgctacaaccctccgcgccgccttccaatcacacctgcacacc
tacctctacccgcacagcacaatcagcatccacgtctcggtgctctcgtctgacggctcg
ctcctcgccgccgccatcaatgcctgtacgctcgcccttgtcgacgccggaatccccatg
cccggcctcctctgcggctgcacggccggcatgagcggcagcgcgtcgaccccgcgcgat
cccagcgaagactcgctggacccattactggacctttcgttgccggaggagcaggaattg
ccgtttttaacggttggtacgacgacagcggtgccggtgggcgagatggcactggatgag
gcggatgcggaggaggaggagatgaaggtgtcgatgctgaatatggattccaaggtgcat
tgtacgtatatcgagacaatgctggctgttgggattgatgggtgtaagcagattcgggag
gtgttggatggagtgattaaaggccggtag
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