Aspergillus chevalieri: ACHE_30624A
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Entry
ACHE_30624A CDS
T08080
Symbol
RPB1
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ache
Aspergillus chevalieri
Pathway
ache03020
RNA polymerase
ache03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ache00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACHE_30624A (RPB1)
09124 Replication and repair
03420 Nucleotide excision repair
ACHE_30624A (RPB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ache03021
]
ACHE_30624A (RPB1)
03400 DNA repair and recombination proteins [BR:
ache03400
]
ACHE_30624A (RPB1)
Enzymes [BR:
ache01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACHE_30624A (RPB1)
Transcription machinery [BR:
ache03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
ACHE_30624A (RPB1)
DNA repair and recombination proteins [BR:
ache03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
ACHE_30624A (RPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
SMBP
Motif
Other DBs
NCBI-GeneID:
66980996
NCBI-ProteinID:
XP_043135159
UniProt:
A0A7R7VL02
LinkDB
All DBs
Position
3:complement(join(1722758..1722773,1722830..1727697,1727762..1727832,1727894..1728050,1728113..1728241))
Genome browser
AA seq
1746 aa
AA seq
DB search
MSNVYFPYSKAPLRTIKEIQFGLFSPEEIKRMSVVHVEYPETMDEQRQRPRAKGLNDPRL
GTIDRQWNCETCEEGQKECPGHFGHIELATPVYHIGFLTKIKKLLETVCHNCGKIKAKTD
DTRFLQALRVRDPKRRFDQIWRLSKDVLVCEADPPEDEDDPFSKEGKEKSSGHGGCGNAQ
PTIRKEGISLVGTWKPSKSMMEEDDMPQPEKKTITPQMALNVFRNISFDSVRIMGLSNDY
ARPEWMVITVLPVPPPPVRPSVLVGGSTSGQRGEDDLTYKLAEIVRANQNVQRCEQEGAP
EHVVREFESLLQYHVATYMDNDIAGQPKAMQKSNRPVKALRSRLKGKEGRLRQNLMGKRV
DFSARTVITGDPNLSLDEVGVPKSIARTLTYPEVVTPYNIEKLQHLVSNGPNEHPGARYI
VRDNGERIDLRHARRAGGQQLLYGWKVERHVMDGDVILFNRQPSLHKESMMGHRVRVMPY
STFRMNLSVTSPYNADFDGDEMNLHVPQSEESRAELSELALVPHNIVSPQRNGPLMGIVQ
DTLCGIYKICRRDTFLTKEQVMNIMLWVPDWDGVIPPPAIIKPRPRWTGKQMISMALPSG
LNLLRVDKDNSALAEKFSPLADGGLLIHGGQLMYGLLSKKTVGASGGGVIHTIFNEYGPE
ATVGFFNGAQAIVNYWLLHNGFSIGIGDTIPDPLTIQRIENCVRNRKKEVEEITATATEN
QLEALPGMNVRETFESKVSRALNNARDEAGSETEKSLKDLNHAIQMARSGSKGSTINISQ
MTAVVGQQSVEGKRIPFGFKYRTLPHFTKDDYSPESRGFVENSYLRGLTPTEFFFHAMAG
REGLIDTAVKTAETGYIQRKLVKALEEVTVKYDGTVRNSLGDIIQFIYGEDGLDGAHIEN
QRVDVIRCSDDKFRDRFRVDLMDPERSLGPDVLEQANEIAGDMEVQRYLDEEWEALLRDR
AFLRTVAKEDEEMMQLPINVQRILEMARNTFRIREGTISDLHPAEVVPQVQSLLDRLLVV
RGDDPISREAQDNATLLFKAQLRSRLAFRRLVTEYSMNKLAFQHVIGAIESRFARAAASP
GEMVGVLSAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRIKEILNVATNIKTPSMTVYQ
EPAKSHDKEGAKQLRSAVEHTSLRSVTEATEIYYDPDIQTTVIENDRDMVESYFIIPEDV
TDDSSRQSKWLLRIILSRPSLLDKGLTVQDVASRIKQAYPKDIAVLFSDNNADEQVIRIR
QIQDSKEDEEDDDIEYDVTLKKLEQHLLDTLTLRGVPGVDRAFINEKNNVRVLEDGSLFT
SRTDPLCKQWVLETSGSSLGEVLAIPGVDATRTYSNQFIEVFEVFGIEAARSAVLRELTQ
VLAFDGSYVNHRHLALLVDVMTVRGYLTPVTRHGINRADNGALMRCSFEETVEILLEAAA
FGELDDCRGVSENLILGQMAPAGTGEFDIYLDQNLLNTVVSNNARYGVMGSIGAKDAIIS
DGAATQYDTGSPMQESAYIGTPDPESNFSPIRQAGAETPGVFTDYQPSAGFGGFSPGPTS
PAGYSPTSPFNTSPTSPGYSPTSSYSPTSPGMSITSPRFMTSPGFSPASPSFAPTSPAYS
PTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGG
AGRHLSPTSPTSPKYTPTSPGWSPTSPQQYSPTSPNFAGSPTSPGGPTSPSYSPTSPAYS
PTSPRQ
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgtttacttcccctactcgaaggcgccgctgcgcacgatcaaggaaatccag
tttggtctcttctcgccagaagagatcaaacggatgagtgtggtccatgtcgaatacccg
gagacaatggacgagcaacggcagcgaccgcgagcaaagggcttgaatgatcctcgtctg
ggtacgattgatcgccagtggaactgcgagacttgcgaggaaggtcagaaagaatgccca
gggcatttcggacacatcgaacttgcaacaccggtttatcatattggtttcttgaccaag
attaagaaactgctggaaactgtctgccacaactgtggaaagatcaaagccaaaacggat
gatactaggtttctccaagctttgcgagtaagagacccgaagaggcgtttcgatcagatc
tggcgactttccaaggacgtgttggtctgtgaagccgacccccccgaggatgaagatgat
ccgttttcgaaagagggcaaggaaaagagcagtggtcacggtggttgtggtaatgcccaa
cctacaattcgcaaggaagggatatcgttggtcggaacgtggaagcccagcaagagcatg
atggaggaggacgacatgccgcaacccgagaagaagaccatcactccgcagatggctctc
aacgttttccgcaacatctcctttgactctgttcgcatcatgggtctgagcaacgactat
gcccgtccagagtggatggttattaccgtcctgccggtcccgccccctccggtccgccca
agtgttcttgttggcggtagtaccagtggccagcgcggtgaggatgatttaacatacaaa
ttggctgaaattgtccgagcgaaccagaacgttcaacgctgtgagcaggaaggtgcccct
gaacatgtggtgcgcgagttcgagtcgttgttgcaataccacgttgctacctacatggat
aacgacattgctggtcaacccaaggccatgcagaaatctaaccgacctgtcaaggctctg
cgttctcggttgaagggtaaggagggtcgtctgcggcaaaacttgatgggtaaacgtgtg
gacttctctgctcgtactgtcatcacgggtgatcccaatttgtcgcttgatgaagttggt
gtgccgaagagtattgccaggactttgacttaccctgaagtcgttacgccgtacaatatt
gaaaagttacaacatctcgtttcaaacggccccaatgagcaccccggtgctcgttacatc
gtcagagacaatggtgaacgtatcgatcttcgtcatgcgagaagggctggcggccagcag
cttctctatggatggaaagtcgaacgccatgtcatggatggcgatgtcattctatttaac
cggcagccgtctcttcacaaagagtctatgatgggtcatcgtgtacgagtgatgccgtat
tcgacgttccgaatgaacttgtctgttacgagtccttataacgcagattttgacggtgac
gaaatgaacttgcacgtgccacagagcgaagagtctcgcgcagaactcagcgagcttgct
ttagttccccacaacattgtgtcgcctcagcgtaacggcccccttatgggtatcgtccaa
gataccctctgtggtatctacaagatttgtcgacgggacaccttcttgaccaaagagcag
gtgatgaacattatgctttgggttcctgactgggacggagttatcccgccaccggctatc
atcaagccgagacccagatggacagggaaacagatgatcagtatggcgcttccctctggg
ttgaaccttcttcgtgtggacaaggacaattctgccctcgcggagaagttctctcctctg
gctgacggtggtctccttattcacggaggccagctcatgtatggattgctctccaagaag
accgtcggtgctagtggtggtggtgttattcacaccattttcaacgagtatggtccagaa
gctaccgtgggctttttcaacggcgctcaggccattgtcaactattggttgctgcacaac
ggtttcagtattggtatcggtgacacgattccagacccgcttacaattcagagaattgaa
aactgtgttcgcaaccgaaagaaggaggttgaggaaattactgccaccgccacagagaac
cagcttgaggcactgcccggtatgaatgtgcgagaaacctttgaaagtaaggtctcgcgc
gctctcaacaatgctcgtgatgaggccggtagtgagaccgagaagagtttgaaggatctg
aatcacgctattcagatggctcgctcgggatccaagggttccacgattaacatctctcaa
atgactgctgtcgtgggacaacagtccgttgaaggaaagcgtattcccttcggtttcaaa
tatcggacattgccgcacttcaccaaggacgactactcgccagagtcccgtgggtttgtt
gagaactcgtacttgcgtggcttgactccaaccgaattcttcttccacgccatggctggt
cgtgagggtcttattgatactgctgtcaagactgctgaaactggttacatccagcgtaag
ctggttaaagcactggaagaggttaccgtcaagtatgacggcactgtccggaactccttg
ggcgatattattcaattcatctacggtgaagatggtctcgacggtgctcacattgagaac
cagcgtgtcgatgtcattaggtgctctgacgacaagttcagggatcgtttccgtgttgat
cttatggaccctgaacggagtcttgggcctgatgtcttggagcaggccaacgagattgct
ggtgatatggaagttcaacgttacctcgacgaggaatgggaagcgctcctcagggaccgt
gcgttcctccgtaccgttgcaaaggaagatgaagaaatgatgcaacttccgattaacgtg
caaagaattctcgaaatggccagaaatacatttagaattcgcgagggaaccatcagtgac
ctgcatcctgcagaggtggtccctcaggtccagtcactgcttgatcgccttctggtggtt
cgtggtgatgaccccatttcgcgcgaggcccaggataatgccactttgctgttcaaggcg
cagcttcgcagccgattggcgttccggagacttgtcactgaatattcgatgaacaagctc
gcattccagcacgtgattggtgccatcgaaagccgtttcgcaagggccgctgccagtcct
ggtgagatggtcggtgtcctctctgcgcagtccattggtgagcctgctacgcagatgaca
ttgaacactttccactttgctggtgtttcggccaagaacgttactctcggtgtacctcgt
atcaaggaaattcttaacgtcgccacgaacatcaagactccgtcgatgactgtgtaccag
gagcctgccaagtcgcacgacaaggagggtgccaagcagctgcgtagtgctgtggagcac
accagtctgagatcggttaccgaggctactgaaatctactacgatcctgacatccagact
acggtgatcgagaacgatagggatatggtggagtcatacttcattatcccagaagatgtt
acggatgactcttctcggcagtcgaagtggttgctgcgtattatccttagtcgaccttcg
cttcttgataagggtcttacagtacaggacgtcgcgtctagaatcaagcaagcttaccct
aaggatatcgcagttctcttcagtgataacaacgccgatgaacaggttattcgtatccgt
caaattcaggatagcaaagaggatgaagaggatgatgatattgagtacgatgttacactc
aagaaattggagcaacatcttttggatactcttactcttcgtggcgtaccgggcgttgac
cgagcattcattaacgagaagaacaacgtccgagtgctcgaagatggctcccttttcaca
agcaggacagacccactctgcaaacaatgggtcctcgaaaccagcggttcttccctgggc
gaagttctggcgattcctggagtcgatgctacgcgtacctattcaaaccagtttattgaa
gtgtttgaagtctttggtattgaagctgcacgttcagccgtccttcgtgaattgactcag
gtgttggccttcgacggttcgtatgtcaaccaccgtcacctggcgttgctggtcgatgtt
atgactgttcgtgggtacttgactccggtcactcgtcacggtatcaaccgtgcagacaat
ggtgcgcttatgcgttgctctttcgaagagacggttgaaatcctcttggaggcagccgcc
tttggagagctcgacgattgccgcggtgtctctgagaacctgattctaggtcagatggca
cccgctggtacgggagaattcgacatctacctagaccagaacctgctcaacaccgtcgtc
tcgaacaacgcgcggtatggtgttatgggatcgatcggtgccaaggatgctatcatctct
gacggtgctgcgacccaatatgacactggttctcccatgcaggagagtgcgtacatcggc
actcccgaccccgaatcgaacttctctccgattcgccaggccggtgccgagactcctggt
gtttttactgactatcagccatctgctgggtttggtggattcagtccagggccgacaagt
ccggctggatactccccgacaagcccattcaacacaagtccaacgtcacctggctattct
ccgacgtcgagttactctcctacgtcacctggcatgtccatcaccagtcctcgtttcatg
acttcgcctgggttctctcctgccagtccgtcgttcgcccctacatcgcctgcttactcg
ccaacgtcgccggcatatggacaagcctccccgacgtctccgtcctactctccgacgtcg
cctgggttctcccccacctcgcccaactacagccctacatcgccaagcttcagtccggct
tctcctgcctttagccctacgtcacctagctacagtccaaccagccctgctattggtggc
gcaggccggcacttgtctcccacttcacctacctctcccaagtacacgcccacatctcca
ggctggtcgcctaccagccctcagcaatactcaccaacctcgccgaactttgctggctca
cccacgtctcctggcggacccacatcccccagttatagtcctacctcgccagcatacagc
cctacgtctccacgtcagtaa
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integrated database retrieval system
