KEGG   Aspergillus chevalieri: ACHE_40909A
Entry
ACHE_40909A       CDS       T08080                                 
Symbol
LSM4
Name
(RefSeq) RNA processing protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
ache  Aspergillus chevalieri
Pathway
ache03018  RNA degradation
ache03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ache00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ACHE_40909A (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACHE_40909A (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ache03019]
    ACHE_40909A (LSM4)
   03041 Spliceosome [BR:ache03041]
    ACHE_40909A (LSM4)
Messenger RNA biogenesis [BR:ache03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     ACHE_40909A (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     ACHE_40909A (LSM4)
Spliceosome [BR:ache03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    ACHE_40909A (LSM4)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 66982704
NCBI-ProteinID: XP_043136867
UniProt: A0A7R7VPD6
LinkDB
Position
4:complement(join(2507810..2507971,2508083..2508274,2508348..2508350))
AA seq 118 aa
MLPLGILTAAQGHPMLVELKNGETLNGHLANCDNWMNLVLKEVVQTSPEGDRFFKLPEVY
VRGNNIKYLRIPEEIIDIVKEQQQARDSGRGRGGYRGDGRDRGRGGRGRGRGRGRGGS
NT seq 357 nt   +upstreamnt  +downstreamnt
atgttaccattgggcatcctaacagccgcgcaaggccacccgatgctcgtcgagctcaaa
aatggcgagactttgaacggccacctcgccaactgcgacaactggatgaacctggtgctg
aaggaggttgtgcaaacaagccccgaaggtgaccgcttcttcaagttaccagaggtctac
gtgaggggaaacaatatcaaatacctacggatccccgaagaaatcattgatatcgtcaag
gagcaacaacaggcccgcgactctggtcgcggtcggggtggctacagaggtgatggacgt
gaccggggccgtgggggccgtggacgcggtcggggcagagggcgaggtggaagctaa

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