Aspergillus chevalieri: ACHE_40936S
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Entry
ACHE_40936S CDS
T08080
Symbol
LSM1
Name
(RefSeq) SM-like, degradation of cytoplasmic mRNAs and positively regulates transcription initiation
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ache
Aspergillus chevalieri
Pathway
ache03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ache00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACHE_40936S (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ache03019
]
ACHE_40936S (LSM1)
Messenger RNA biogenesis [BR:
ache03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ACHE_40936S (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
ACHE_40936S (LSM1)
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Gene cluster
GFIT
Motif
Pfam:
LSM
Subterisin
DJR-like_dom
Motif
Other DBs
NCBI-GeneID:
66982731
NCBI-ProteinID:
XP_043136894
UniProt:
A0A7R7VPL7
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All DBs
Position
4:join(2599212..2599386,2599481..2599549,2599613..2599728,2599792..2599968)
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AA seq
178 aa
AA seq
DB search
MERLSIHDPPPAATQQSQQQPPQQQQQNLGSASMVTQGPPQLPPQMFTTAAQLLDLTDKK
LVLVLRDGRKLVGVLRSWDQFANLVLQDTVERIYAGGLYADIPRGIFIVRGENVLLLGEI
DLDREDDVPPNIQQAPFEEVYALKKKEDSERQTSDKKRHGNLQKLGFEAEHSGETLLF
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcctctcgatccacgaccccccgcctgccgccacgcaacagtcgcaacaacaa
ccaccccaacagcaacaacaaaatctcggatcagcctcgatggttacacaaggaccgcct
caattaccgccgcagatgtttacgactgctgctcagttgctggatttgacggataagaag
ctggttttggtccttcgtgatgggagaaaattggttggggtgttgaggagttgggatcag
tttgcgaacctcgtgcttcaagataccgtcgaacgaatctacgccgggggcctttatgcc
gatattccccgggggatcttcattgttcggggagagaatgtcttgttgcttggggaaatt
gatctagatagggaagacgatgtccccccgaatatccaacaagcgccattcgaagaagtc
tatgcattgaagaaaaaggaggactcggaacggcagaccagcgacaagaaacgacatggc
aatttacaaaaactgggattcgaagctgaacatagtggggagactcttctgttttag
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integrated database retrieval system
