Aspergillus chevalieri: ACHE_41171S
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Entry
ACHE_41171S CDS
T08080
Symbol
PRP43
Name
(RefSeq) DEAH-box ATP-dependent RNA helicase prp43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ache
Aspergillus chevalieri
Pathway
ache03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ache00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACHE_41171S (PRP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ache03041
]
ACHE_41171S (PRP43)
03009 Ribosome biogenesis [BR:
ache03009
]
ACHE_41171S (PRP43)
Enzymes [BR:
ache01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACHE_41171S (PRP43)
Spliceosome [BR:
ache03041
]
Complex A
U2 snRNP components
U2 related factors
ACHE_41171S (PRP43)
Complex B
ACHE_41171S (PRP43)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
ACHE_41171S (PRP43)
Ribosome biogenesis [BR:
ache03009
]
Eukaryotic type
90S particles
Helicases
ACHE_41171S (PRP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
Flavi_DEAD
SRP54
AAA_30
ABC_tran
AAA_7
T2SSE
nSTAND3
Motif
Other DBs
NCBI-GeneID:
66982965
NCBI-ProteinID:
XP_043137129
LinkDB
All DBs
Position
4:join(3245282..3245598,3245670..3247536,3247592..3247720)
Genome browser
AA seq
770 aa
AA seq
DB search
MVDRRPETEDGSRAKRQKMAKTETDPKDNPYLAHMYADENLNGNGWDDSMAEKNPAYGKL
KRHRTTAQLAKDVEDGEVNPFNGQPFSNKYVSILQTRRDLPVHAQRDEFLQLYQKSQILV
FVGETGSGKTTQIPQFVLFDDLPQTQGKQVACTQPRRVAAMSVAQRVAAEMDCKLGDEVG
YSIRFEDMTSPKTILKYMTDGMLLREAMNDNTLSRYSTIILDEAHERTMATDVLMGLLKE
VVERRPDLKIIIMSATLDAQKFQKYFMDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRT
VLQIHASEDEGDILLFLTGEEEIEDSVRKIALEADEMMREADAGPLKCYPLYGSLPPHMQ
QRIFEPAPAPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESL
LVSPISKASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIDQTYPELLRSNLSSTVLELKK
LGIDDLVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTQLGRLASEFPLDPALAVMLI
SSPEFYCSNEILSITALLSVPQVFVRPASQRKRADEMKNLFAHPDGDHLTLLNVYHAFKS
PEAQENPKQWCHDHFLSLRSLQSADNVRLQLLRIMERSELDMVSTPFEDKRYYENIRRAL
CAGFFMQVAKKETQGKNQYITVKDNQNVLLHPSTVLAIEAEWVLYNEFVLTSKNYIRTVT
AVKPEWLLDIAPTYYDISTFAKGDVRSSLLRAAERLARKEKMRADPSKRR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcgtcgtccagaaactgaggacggttcgcgagccaagcgtcagaaaatggcg
aagaccgagacggatcccaaagacaatccgtacctggctcacatgtacgccgatgagaac
ttgaacggcaatgggtgggacgatagtatggcagagaagaacccggcctatggcaagtta
aagaggcaccgcacgacggcgcagctggcgaaggatgttgaagatggcgaagtcaacccg
ttcaacggacagcctttttcgaacaaatatgtctcgatcttgcagactcgtcgcgatctt
ccagttcatgctcagagagatgagttcctccagctctaccaaaagtcccagattctagtc
ttcgtcggtgaaaccggttccggaaagacaacacagatcccccaattcgtcctattcgat
gaccttccacagacacaaggcaaacaggtggcctgtacgcagccgcgacgtgtggcggcc
atgtccgtcgctcagcgtgtggctgcggagatggattgcaagctgggagatgaagttggt
tacagtatccgtttcgaggacatgacgagtcccaagacaatcctcaagtatatgacggac
ggtatgcttttgagagaagcaatgaacgacaacacgctttcgcggtacagcacgatcatc
ctggacgaagctcacgaaagaactatggccactgatgtgttgatgggtctgttgaaggag
gttgtcgagcgtcgcccggatttgaagattattatcatgtctgctactctggatgcgcaa
aagttccagaaatacttcatggacgctcccctgctcgctgttcccggacgaacccacccc
gttgagattttctacacccccgagccggagcaggactacgttgaggccgcaattcgcacg
gttttgcagatccacgccagcgaggatgaaggcgatatcctattgttcttgacgggtgag
gaagagatcgaggattccgtgcgcaagattgctctcgaggcagatgagatgatgcgagaa
gccgacgctggtcccttgaaatgctacccgctgtacggtagtcttcctccacacatgcag
caacgtattttcgagccagcaccggctccgcgacgcccaggtggccgtcctggtagaaag
gtcattgtgtcgaccaacattgctgaaacgtcgcttaccattgatggtatcgtttacgtc
gtggaccccggtttctctaagcagaagatctacaacccccgtatccgtgttgagtctctc
ctcgtttcccccatttcgaaggcttctgcacaacagagagctggtcgtgccggtcgtaca
cgacccggaaagtgcttccgtctttacactgaggccgctttcaagaaggaactgattgac
caaacatatcccgaactgctccgttccaacctttcgtcgacggtattggaattgaagaaa
cttggtatcgacgacttggttcacttcgacttgatggaccctcctgcgccagaaaccctg
atgagagccctggaggaactcaactacctggcctgtctcgacgacgacggcaacctgact
caactgggtcgtctcgcatcagagttccctctcgatcctgccctggctgtcatgttaatt
agttcgccagagttctactgctcaaacgagatcctctccatcacggcactcttgtccgtg
ccgcaagtcttcgtcagacccgcctctcaacgcaagcgcgcagacgaaatgaaaaatcta
ttcgcccaccctgacggcgaccacctcaccctcctcaacgtataccacgcattcaagagc
cccgaagcccaggagaaccccaagcaatggtgccacgaccacttcctctccctccgatcc
ctccaatccgcagacaacgtccgcctgcaactcctccgcatcatggagcgctcggagttg
gacatggtttcgacaccattcgaagacaagcgctactatgagaatatccgccgcgcacta
tgtgcgggattcttcatgcaggttgccaagaaggaaactcagggcaagaaccagtacatc
actgtcaaggataaccagaacgttcttctgcacccgtctactgtgctggcaattgaagcg
gaatgggtcctctataacgaattcgtcctgacgtccaagaactacatccggacggtcact
gctgtcaagccggaatggctattggacattgcccccacatactatgatatctccaccttc
gccaagggcgatgtccgctcgtccctccttcgcgccgccgaaagactcgcccggaaagag
aagatgcgcgctgaccctagcaagagacggtaa
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