Aspergillus chevalieri: ACHE_51193A
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Entry
ACHE_51193A CDS
T08080
Symbol
CSL4
Name
(RefSeq) exosome 3'->5 exonuclease subunit ski4 (Csl4)
KO
K07573
exosome complex component CSL4
Organism
ache
Aspergillus chevalieri
Pathway
ache03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ache00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACHE_51193A (CSL4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ache03019
]
ACHE_51193A (CSL4)
Messenger RNA biogenesis [BR:
ache03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ACHE_51193A (CSL4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
ACHE_51193A (CSL4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Prok-E2_C
IFTAP
Motif
Other DBs
NCBI-GeneID:
66984353
NCBI-ProteinID:
XP_043138517
UniProt:
A0A7R7VSK8
LinkDB
All DBs
Position
5:complement(3405699..3406475)
Genome browser
AA seq
258 aa
AA seq
DB search
MAATFPSLAIPGQRLGSTISYAAGPGTHVHDAVIYASIAGPVIVDQAQANSKAKSLLTVS
RSINRQTGATQSGTATVKPTASTIAPKPATTKPKLKYNTLPAVESVVLARVTRVQKRQVI
VSILVVLDELSSSQVSDPSKTTSDNDNIESILSSAANPENHSSSDELRFQALIRKEDVRA
VEKDRVVMDEMFRVGDIVRGTIISLGDQSFYYITTARNDLGVVMARSEAGNMMFPVSWKE
MRDPVTGLGELRKVARPF
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacctttccatccctggccattccaggtcagcgattgggttcgactatctcg
tatgccgcaggtccaggcacacatgtgcacgatgcagtcatttacgcatccattgctggc
cccgtcatagttgaccaagcccaggcaaattccaaagcaaagtctctgcttactgtctca
cggtcaatcaacagacagacaggagcaacccagagcggcacagctaccgtgaagccaacc
gcctcgacaattgctccgaagccagctactacaaagcccaaactgaagtacaacaccctc
ccggcagtggagtctgtcgttctagctcgtgtgactcgcgtgcagaaacgtcaagtcatc
gtgtcaatccttgtcgtcttggacgaactctccagctcgcaggtttcagacccgtcgaag
acgacttctgacaatgacaacatagagtcaattctttcgtcggccgcgaatcccgagaac
cacagttcttctgatgagttgcggttccaggctctgattcggaaagaggatgtgcgcgct
gtcgagaaggatcgtgtcgtgatggatgagatgttccgtgttggggatattgtgcggggc
acgattatctcgctgggtgatcagagtttctactatatcactactgcacggaatgacctt
ggtgttgtcatggcgcggagtgaggctgggaatatgatgtttccggttagctggaaggaa
atgagagatcctgttactggtcttggggagttgaggaaggtcgcgcgtccgttctga
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