Achromobacter sp. HNDS-1: ABFG95_03020
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Entry
ABFG95_03020 CDS
T10763
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
achh Achromobacter sp. HNDS-1
Pathway
achh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
achh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABFG95_03020 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achh03400
]
ABFG95_03020 (uvrB)
DNA repair and recombination proteins [BR:
achh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABFG95_03020 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABFG95_03020 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
AAA_30
UVR
Kinesin
AAA_22
UB2H
DUF87
Microtub_bd
DUF7125
Motif
Other DBs
NCBI-ProteinID:
XBO99463
UniProt:
A0AAU7LC35
LinkDB
All DBs
Position
complement(691140..693266)
Genome browser
AA seq
708 aa
AA seq
DB search
MPKSAIDPSAAGAAAVGSVTDGAADAAPGAAAAAPGPGYVDYPGSPFHLYQPYPPAGDQP
GAIDGLVQGVQDGLMYQTLLGVTGSGKTYTMANVIAQLGRPALVLAPNKTLAAQLYAEMR
EFFPKNAVEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTII
VGTVSCIYGIGNPGDYHAMVLILRAGDQISRREILARLVAMQYTRNDAEFTRGVFRVRGE
TIDIFPAESAELALRLTLFDDEIESLELFDPLTGRIRQKLPRFTVYPGSHYVTPRDTVLR
AIETIKEELRERTKRFVDDGHLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAP
GEPPPTLIDYLPADALMFIDESHVTIGQLSAMYRGDRSRKETLVQYGFRLPSALDNRPLK
LEEFEARMRQCVFVSATPAAYEKEHADNVVEQVVRPTGLVDPIVEVLPARTQVDDLLGQI
KARTSQGERVLVTTLTKRMAEDLTDFLTEHGVRVRYLHSDIDTVERVEIIRDLRLGTFDV
LVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGHAILYADRITD
SMQRAMEETSRRRAKQLQFNADHGITARGVQKAVRELIDGIVAPVQHDALEAAVPAELLK
DEKALAREIKRLEKLMMDHARNLEFEQAAAARDALTALKQRVLLDGAV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagagcgcaatagacccgagcgcggcgggtgccgcagccgttggctccgtcacc
gacggggcggccgatgcggcccctggcgctgccgcggcggcccccggcccggggtacgtc
gattaccccggcagcccgttccacctgtaccaaccctatccgcccgccggcgaccagccg
ggcgccattgatggattggtccagggcgtgcaggacggcctgatgtaccagacgctgctg
ggcgtgaccggctcgggcaagacctacaccatggccaacgtcatcgcccagctggggcgg
ccggcgctggtgctggcgcccaacaagacgctggccgcgcagctgtacgcggaaatgcgc
gagttctttcccaagaacgcggtggagtacttcgtctcgtactacgactactaccagccc
gaagcctacgtgccgacgcgcgacctgttcattgaaaaggactcgtcgatcaacgagcac
atcgagcagatgcgcctgtcggccaccaagagcctgctggaacggcgcgacaccatcatc
gtcggcaccgtgtcgtgcatctacggtatcggcaaccccggcgactaccacgcgatggtg
ctgatcctgcgcgccggcgaccagatttcgcggcgcgagatcctggcgcggctggtggcc
atgcagtacacccgcaacgacgccgaattcacgcgcggcgtgttccgcgtgcgcggcgag
accatcgacatcttcccggcggaaagcgccgagctggcgctgcgcctgacgctgttcgat
gacgaaatcgaaagccttgagctgttcgatccgctgaccggccgcatccgccagaagttg
ccgcgcttcaccgtttaccccggttcgcactacgtgacgccgcgcgacaccgtgctgcgc
gccatcgagaccatcaaggaagagctgcgcgagcgcaccaagcgcttcgtcgacgacggc
cacctggtcgaggcccagcgccttgagcagcgcacccgcttcgacctggaaatgctgcag
gaactgggattctgcaagggcatcgagaactactcgcgccacctgtccggcgccgcgccg
ggggagccgccgcccacgctgatcgactatctgccggccgatgcgctgatgttcatcgac
gagagccacgtcaccattggccagctcagcgccatgtaccggggtgaccgctcgcgcaag
gaaaccctggtgcagtatggcttccggctgccatcggcgctggacaaccggccgctcaag
ctcgaggaattcgaggcccgcatgcgccagtgcgtgttcgtctcggccacgccggcggcg
tacgaaaaggagcatgccgacaacgtggtcgagcaggtggtgcgccccaccggcctggtc
gatccgatcgtggaggtgctgccggcacgcacccaggtcgatgacctgctggggcagatc
aaggcgcgcaccagccagggggagcgggtgctggtcaccacgctgaccaagcgcatggcc
gaggacctgaccgacttcctgaccgagcacggggtgcgggtgcgctacctgcactcggac
attgacacggtggaacgggtggaaatcatccgcgacctgcgcctgggtacgttcgacgtg
ctggtgggcatcaacctgctgcgcgaaggactggatatcccggaagtgtcgctggtggcc
atcctggatgccgacaaggaaggcttcctgcgctccgagcgcagcctgatccagaccatt
ggccgggcggcgcgcaacctgaacggccacgccatcctgtatgccgaccgcatcaccgac
tcgatgcagcgcgccatggaagaaaccagccggcgccgcgccaagcaactgcagttcaat
gccgaccatggcattaccgcgcggggagtgcagaaggcggtgcgcgagctgatcgacggc
atcgtcgcgccggtgcagcacgacgcgctggaagccgcggtgccggccgaattgctgaag
gacgaaaaggccctggcgcgcgagatcaagcgcctggaaaagttgatgatggaccacgcc
cgcaacctcgaattcgaacaggccgcggccgcccgcgatgccttgacggccctcaagcaa
cgggtgctgttggatggcgcggtatga
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integrated database retrieval system
