Achromobacter sp. HNDS-1: ABFG95_09545
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Entry
ABFG95_09545 CDS
T10763
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
achh Achromobacter sp. HNDS-1
Pathway
achh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
achh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABFG95_09545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
achh03000
]
ABFG95_09545
03400 DNA repair and recombination proteins [BR:
achh03400
]
ABFG95_09545
Enzymes [BR:
achh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ABFG95_09545
Transcription factors [BR:
achh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ABFG95_09545
DNA repair and recombination proteins [BR:
achh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABFG95_09545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
XBP00697
UniProt:
A0AAU7LH49
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All DBs
Position
2067891..2069339
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AA seq
482 aa
AA seq
DB search
MNLDHDACYSAIRVRDARYDGRFFTAVKTTRIYCRPVCPARTPLSRNVVFYPTAAAAQEA
GFHPCLRCRPETAPAAGRARDLPDSVARALGLIELGALDEAGVDALAARLGVGERQLRRQ
FRQHLGASPVAVAQTRRVLLAKQLIHETRLPMAEIAFAAGFGSIRRFNESFLALFGRAPG
ELRRSGKPVISAGPQGEIKLLLRYRPPYDWTAMLDFLRVRAIPGIERVTADSYTRTIELD
GAQGTVRVEPGTGNALQATVRFPQLHALPTIIARLRRVFDLASDPAALAAQLAHDPVMAA
LTAARPGLRVPGAWDGFELALRAVLGQQITVGAAIKLAGKLVAAHGQPLEQPDGDLTHLF
PTPAAVAPVDLAPLGMPRSRAATLSAVAAAALADPRLFDTSNSLDTAVARLREIRGVGEW
TAQYIALRQLREPDAFPASDIGLIRALEKLESREYTPAQLLARAEAWRPWRAYAAQHLWA
EY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgaccacgacgcctgctacagcgccatccgcgtgcgcgacgcccgttacgac
ggccgcttcttcaccgcggtcaagaccacgcgcatctactgccgcccggtctgcccggcg
cgcacgccgctgtcgcgcaatgtcgtcttctaccccacggcagcggccgcgcaggaagcg
ggcttccacccctgcctgcgctgccgcccggaaaccgcgcccgccgccggtcgcgcccgc
gatttgcccgacagcgtcgcgcgcgcgctcggcctgatcgaactcggcgcgctcgacgaa
gccggcgtcgacgccctggccgcgcgcctgggcgtgggcgaacgccagttgcggcggcag
ttccgccagcacctgggcgcgtcgcccgtggccgtggcgcagacccggcgcgtgctgctg
gccaagcaactgatccacgaaacccgcctgcccatggccgagatcgcattcgcggccggc
ttcggcagcatccgccgcttcaacgagagcttcctggccctgttcggccgcgcgccgggc
gaactgcgccgctccggcaagcccgtcatctcggccggcccgcagggcgaaatcaaactg
ctgctgcgctaccgcccgccctacgactggactgccatgctcgacttcctgcgcgtgcgc
gccatccccggcatcgaacgggtcacggccgacagctacacgcgcaccatcgagctggac
ggcgcccagggcaccgtgcgggtcgaacccggcacgggcaacgcactgcaggccaccgtc
cgttttccccaactgcatgccctgcccaccatcatcgccaggctgcgccgcgttttcgac
ctggccagcgaccccgccgcgctcgcggcccagcttgcccacgatcccgtcatggccgcc
ctcaccgccgcccgcccgggcctgcgcgtgcccggcgcctgggacggcttcgaactggcg
ctgcgcgccgtcctcggccagcagatcaccgtcggcgccgccatcaaactcgccggcaag
ctcgtcgccgcccacgggcaacccctggagcaacccgacggcgacctgacccatctgttc
cccaccccggccgccgtcgcccccgtcgacctcgccccgctcggcatgccccgcagccgc
gccgccaccttgtccgccgtcgccgccgccgccctggctgacccgcggctgttcgacacc
agcaacagcctcgacaccgccgtcgcccgcctgcgcgaaatccgcggcgtcggcgaatgg
accgcccaatacatcgccctgcgccaactgcgcgaacccgacgcctttcccgcctccgac
atcggcctgatccgcgccctggaaaaactcgaatcccgcgaatacacccccgcccaactc
ctcgcccgcgccgaagcctggcgcccctggcgcgcctacgcggcccagcatctgtgggcg
gaatactga
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