Achromobacter sp. HNDS-1: ABFG95_13085
Help
Entry
ABFG95_13085 CDS
T10763
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
achh Achromobacter sp. HNDS-1
Brite
KEGG Orthology (KO) [BR:
achh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
achh03009
]
ABFG95_13085 (rimO)
Enzymes [BR:
achh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ABFG95_13085 (rimO)
Ribosome biogenesis [BR:
achh03009
]
Prokaryotic type
ribosomal protein modification factors
ABFG95_13085 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
TRAM
YajR_YAM
DUF5005
Motif
Other DBs
NCBI-ProteinID:
XBP01369
UniProt:
A0AAU7LHI6
LinkDB
All DBs
Position
2820256..2821572
Genome browser
AA seq
438 aa
AA seq
DB search
MSSPKVGFVSLGCPKALVDSERILTQLRTEGYQVTPEYNDADVVVVNTCGFIDSAKAESL
EAIGEALAENGKVIVTGCMGVEESVIRNVHPSVLAVTGPQQYEEVVRAVHDAAPPKKDHN
PYLDLVPPQGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVGDVLSEAERLVK
AGVKELLVISQDTSAYGVDVKYRSGFWNGRPVRTRMTELCTALSEMGVWTRLHYVYPYPH
VDEVIPLMAEGKILPYLDIPFQHASPRILKAMKRPAFEDKTLARIKQWREICPDLTIRST
FIVGFPGETEEDFQYLLDWMQEAQLDRVGCFQYSPVEGAPANLLDNPVPDEVKQERWERF
MELQQSISTARLARKVGREIDVLIDEVDEDGAVGRSAGDAPEIDGCVYVSSDRVLKAGDM
VRVRVTDSDEYDLWADTI
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccccaaagtcggctttgtcagcctgggctgtcccaaagccctggtcgactcc
gaacgcatcctgacccaattgcgcaccgaagggtaccaagtcacgcccgagtacaacgac
gcggacgtcgtggtggtcaacacctgtggtttcatcgacagcgccaaggccgagtcgctg
gaagccatcggcgaggcgctggccgagaacggcaaggtcatcgtcaccggctgcatgggc
gtcgaggaatcggtgatccgcaacgtgcaccccagcgtgctggccgtgaccggcccgcag
caatacgaggaagtggtgcgcgccgtgcacgacgccgcgccacccaagaaggaccacaat
ccctacctcgacctggtgccgccgcagggcgtcaagttgaccccgcgccactacgcctac
ctgaagatctcggaaggctgcaatcaccgctgcagcttctgcatcatcccgtcgatgcgc
ggcgacctggtcagccgcccggtgggcgacgtgctcagcgaagccgagcgcctggtcaag
gccggcgtcaaggaactgctggtgatctcgcaggacaccagcgcctacggcgtcgacgtc
aagtaccgcagcggcttctggaacggccgcccggtgcgcacccgcatgaccgaactctgt
acggccttgtccgaaatgggcgtctggacgcgcctgcactacgtgtatccgtatccgcac
gtggacgaagtgattccgctgatggccgagggcaagatcctgccctacctggacatcccg
ttccagcacgccagcccgcgcatcctcaaggccatgaagcgtccggcattcgaggacaag
acgctggcgcgcatcaagcagtggcgcgagatctgccccgacctgaccatccgctcgacc
ttcatcgtcggcttccccggcgaaaccgaggaagacttccagtacctgctggactggatg
caggaagcccagctcgaccgcgtcggctgtttccagtattcgccggtggaaggcgcgccc
gccaacctgctcgacaatccggtgccggacgaggtcaagcaggaacgctgggaacgcttc
atggaactgcagcaatcgatttccaccgcgcgcctggcgcgcaaggtcggccgcgagatc
gatgtgctgatcgacgaggtggatgaagacggcgccgtgggccgcagcgccggcgatgcg
ccggaaatcgacggttgcgtctacgtcagttcggaccgcgtcctcaaggccggcgacatg
gtgcgcgtgcgcgtcaccgactccgacgaatacgacctctgggccgacacgatctaa
DBGET
integrated database retrieval system
