Achromobacter sp. HNDS-1: ABFG95_14330
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Entry
ABFG95_14330 CDS
T10763
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
achh Achromobacter sp. HNDS-1
Pathway
achh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
achh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABFG95_14330 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achh03021
]
ABFG95_14330 (rpoA)
03400 DNA repair and recombination proteins [BR:
achh03400
]
ABFG95_14330 (rpoA)
Enzymes [BR:
achh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABFG95_14330 (rpoA)
Transcription machinery [BR:
achh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABFG95_14330 (rpoA)
DNA repair and recombination proteins [BR:
achh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABFG95_14330 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AAA_lid_4
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
XBP01607
UniProt:
A0AAU7LJR1
LinkDB
All DBs
Position
complement(3088405..3089391)
Genome browser
AA seq
328 aa
AA seq
DB search
MSTQGFLKPRSIEVEPVGTHHAKIVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQMT
GVVHEYSTIPGVREDVVDILLNLKGVVFKLHNRDEVTLVLRKTGAGTVLASDIELPHDVE
IINPGHAICNLTDAGKLEMQIKVEKGRGYVPGNVRALSEDRTHTIGRIVLDASFSPVRRV
SYAVESARVEQRTDLDKLVLDIETNGVISPEEAVRQSARILMDQISVFAALEGAGDSYEA
PVRGTPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLN
EIKEVLAARGLTLGMKLENWPPLGLERP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcaaggtttcctgaagccgcgctccattgaagtcgaaccggtcggcacccac
catgccaagatcgtgatggagccgttcgagcgcggctacggccatacgctgggcaacgcc
ctgcgccgcatcctgctgtcttcgatgaccggctacgcgccgaccgaagtccagatgacg
ggcgtggtgcacgaatactcgaccatcccgggcgttcgcgaagatgtcgtcgacatcctg
ctgaacctgaagggcgtggtcttcaagctgcacaaccgtgacgaagtcaccctggtcctg
cgcaagaccggcgccggcaccgtgctggccagcgacatcgagctgccgcacgacgtcgag
atcatcaaccccggccacgccatctgcaacctgacggacgcgggcaagctggaaatgcag
atcaaggtcgagaagggccgcggctacgtgccgggcaacgtgcgcgcgctgtcggaagac
cgcacccacaccatcggccgcatcgtcctggacgcctcgttcagcccggtccgccgcgtc
agctacgcggttgaaagcgcccgtgtggaacagcgcaccgacctggacaagctggtcctg
gacatcgaaaccaacggcgtcatctcgcccgaggaagcggtgcgccagtcggctcgcatc
ctgatggaccagatctcggtcttcgccgccctggaaggcgccggcgattcgtacgaagcc
ccggtccgcggcacgccgcagatcgacccggtgctgctgcgtccggtcgacgacctggaa
ctgaccgtgcgttcggccaactgcctgaaggccgaaaacatctactacatcggcgacctg
atccagcgtaccgagaacgaactgctcaagaccccgaacctgggtcgcaagtcgctcaac
gagatcaaggaagtcctggccgcacgcggcctgacgctgggcatgaagctcgaaaactgg
cccccgctgggcctggagcgtccgtaa
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