Achromobacter sp. HNDS-1: ABFG95_18485
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Entry
ABFG95_18485 CDS
T10763
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
achh Achromobacter sp. HNDS-1
Brite
KEGG Orthology (KO) [BR:
achh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
achh01011
]
ABFG95_18485
Enzymes [BR:
achh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ABFG95_18485
Peptidoglycan biosynthesis and degradation proteins [BR:
achh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ABFG95_18485
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
XBO96863
UniProt:
A0AAU7L4Y5
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All DBs
Position
complement(3988231..3989649)
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AA seq
472 aa
AA seq
DB search
MNFSRLLLPLLLAVLAGCAGTKSHDSKNLTTNSQGRYIARDTSRTVDLTNPPVDAWDRIR
RGFAIPNLNTDLSQQWTDYYASHPEAVQRMAERAGKYLYFIVDEINRRGLPTELALLPFV
ESAYNPTALSRAQASGLWQFVPATGQHFNLKQDWWRDERRDPIASTNAALDYLEKLFEMQ
GDWYLALASYNWGEGSVQRAMAKNEAAGQPTDYLSLNMPDETRNYVPKLQAIKNIIADPQ
RYAVALPPVGNTPYFVTVQKNSDIDLEIAAKLAEMPLDEFKALNPSFNRPVIRGDHAPTL
LLPADRVEIFNANLTNYKGDLSAWKVYHSRRGESYASIAKRFGVTEAKLRETNDIGSRQK
VASGQSLLVPGDPGAGGVQLASLAAPVGALDSAPVNTGKAPAPRGKAAAPAARGAAARPN
VRTHKVRQGDTLFSLAKQYGTSVDALRALNNLKGNALKIGAQLRVPGTNARG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctcccgactccttctgccgcttctgctggcagtcctcgccggttgcgcagga
accaaatcccacgacagcaagaacctcaccaccaactcccaagggcgctacatcgcccgc
gacacgtcccgcacggtcgacctgaccaatccgccggtcgacgcctgggaccgcatccgc
cgcggcttcgccatccccaacctgaacaccgacctctcgcagcagtggaccgactactac
gcgtcccaccccgaggcggtgcagcgcatggccgagcgtgccggcaagtacctgtatttc
atcgtcgacgagatcaaccgccgcggcctgccgaccgagctggcgctgctgccgttcgtc
gaaagcgcctacaaccccaccgcgctctcgcgcgcccaggcctcgggcctgtggcagttc
gtgccggccaccggccagcacttcaacctgaagcaggactggtggcgcgatgagcgccgc
gaccccatcgcctcgaccaacgcggcgctggactacctggaaaagctgttcgagatgcag
ggcgactggtacctggcgctggcctcgtacaactggggcgagggctcggtgcagcgcgcc
atggccaagaacgaggccgccggccagcccacggactacctgtccctgaacatgccggac
gagacccgcaactacgtgcccaagctgcaggccatcaagaacatcatcgccgacccgcag
cgctacgcggtggcgctgccgccggtcggcaacacgccgtacttcgtgacggtgcagaag
aacagcgacatcgacctggaaatcgccgccaagctggccgagatgccgctggacgaattc
aaggccctgaacccgtcgttcaaccggcccgtgatccgcggcgaccacgcccccacgctg
ctgctgccggccgaccgcgtcgagatcttcaacgccaacctgaccaactacaagggcgac
ctgagcgcctggaaggtctaccactcgcgccgcggcgagtcgtacgcctcgatcgccaag
cgtttcggcgtgaccgaagccaagctgcgcgagaccaacgacatcggctcgcgccagaag
gtggcctccggccaatcattgctggtgccgggcgaccccggcgccggcggcgtgcaactg
gcctcgctggccgcgccggtgggcgcgctggattcggcccccgtcaataccggcaaggcg
ccggcgccgcgcggcaaggccgcggcccccgccgcgcgcggcgcggccgcccgccccaat
gtgcgcacgcacaaagtgcgccagggcgatacgctgttttcgctggccaagcagtacggc
acctcggtggatgcgctgcgcgccctgaacaacctcaagggcaacgccctcaagatcggc
gcccagctgcgcgtgccgggcaccaacgcccgcggctga
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