Achromobacter sp. HNDS-1: ABFG95_19875
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Entry
ABFG95_19875 CDS
T10763
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
achh Achromobacter sp. HNDS-1
Pathway
achh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
achh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABFG95_19875 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achh03400
]
ABFG95_19875 (ruvB)
Enzymes [BR:
achh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABFG95_19875 (ruvB)
DNA repair and recombination proteins [BR:
achh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABFG95_19875 (ruvB)
RecFOR pathway proteins
ABFG95_19875 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
nSTAND3
AAA_22
Rad17
AAA_3
AAA_14
DUF815
RNA_helicase
TsaE
NTPase_1
Bac_DnaA
Sigma54_activ_2
AAA_17
ABC_tran
IstB_IS21
NB-ARC
AAA_28
AAA_18
NACHT
Parvo_NS1
AAA_25
AAA_33
AAA_24
bpMoxR
AAA_PrkA
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
XBO97127
UniProt:
A0AAU7L5G0
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All DBs
Position
4295905..4296978
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AA seq
357 aa
AA seq
DB search
MAIQSDSLSSRPDAPRIVAPQPASPNEESIERALRPKALEEYVGQQRAREQLEIFIAAAR
KRGEALDHVLLFGPPGLGKTTLAHIIAHEMGVQLRQTSGPVLERPGDLAALLTNLEKNDV
LFIDEIHRLSPVVEEILYPALEDFQIDILIGEGPAARSVKLDLQPFTLVGATTRAGMLTN
PLRDRFGIVSRLEFYNADDLGRIVTRSAGLLNATITSDGAAEVARRARGTPRIANRLLRR
VRDYAEVKAGGTIDADVAGRALAMLEVDPQGLDLMDRKLLEAIIHKFDGGPVGVDSLAAA
IGEERDTIEDVIEPYLIQHGYLQRTPRGRTATLTTWRHLGLTPPAGAASGSGELFGK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggccatccagtccgattcgctttcctcccgtcccgacgcgccccgtatcgtggcgccc
cagccggcgtcgcccaacgaggagtcgatcgaacgcgccctgcggcccaaggcgctggaa
gaatacgtcggccagcagcgcgcgcgtgaacagctcgaaatcttcatcgccgccgcccgc
aagcgcggcgaggcgctggaccacgtgctgctgttcggcccgcccgggttgggcaagacc
acgctggcccacatcatcgcgcacgaaatgggcgtgcagctgcgccagacctccggcccc
gtgctcgagcgcccgggcgacctggccgcgctgctgaccaacctggaaaagaacgacgtc
ctgttcatcgacgagatccaccgcctgtcgcccgtggtcgaggaaattctctaccccgcg
ctggaggatttccagatcgacatcctgattggcgaagggccggcggcccgcagcgtcaaa
ctcgacctgcagccgttcacgctggttggcgccaccacccgcgccggcatgctgacgaac
ccgctgcgcgaccgcttcggcatcgtttcgcggctggagttctacaacgccgacgatctc
ggccgcatcgtcacccgcagcgcgggcctgctcaacgccaccattacttccgatggcgcc
gccgaggtggcgcgccgcgcccgcggcacgccgcgtatcgccaaccgcctgctacggcgc
gtgcgcgattacgccgaggtcaaggccggcggcaccatcgacgccgacgtcgccggccgc
gcgctggccatgctcgaggtcgacccgcagggcctggacctgatggaccgcaagctgctc
gaagccatcatccacaagttcgatggcggcccggtgggcgtggacagcctggccgcggcc
atcggcgaagaacgcgacaccatcgaggacgtgatcgaaccctacctgatccagcatggc
tacctgcagcgcacgccgcgcggacgcacggccacgctgaccacctggcgccatctgggc
ctgacgccgcccgccggcgccgccagcggcagcggcgagctgttcggcaagtaa
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