Achromobacter sp. HNDS-1: ABFG95_21440
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Entry
ABFG95_21440 CDS
T10763
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
achh Achromobacter sp. HNDS-1
Pathway
achh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
achh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ABFG95_21440 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achh03019
]
ABFG95_21440 (rnc)
03009 Ribosome biogenesis [BR:
achh03009
]
ABFG95_21440 (rnc)
03036 Chromosome and associated proteins [BR:
achh03036
]
ABFG95_21440 (rnc)
Enzymes [BR:
achh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ABFG95_21440 (rnc)
Messenger RNA biogenesis [BR:
achh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABFG95_21440 (rnc)
Ribosome biogenesis [BR:
achh03009
]
Eukaryotic type
90S particles
RNase
ABFG95_21440 (rnc)
Prokaryotic type
rRNA processing factors
ABFG95_21440 (rnc)
Chromosome and associated proteins [BR:
achh03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ABFG95_21440 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
XBO97420
UniProt:
A0AAU7L6C6
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All DBs
Position
4639289..4640050
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AA seq
253 aa
AA seq
DB search
MSLATLENRLDHHFGDPALLEQALTHRSHGARHNERLEFLGDSVLNFVVAAMLFERYAKI
DEGDLSRLRANLVKQASLADIAQRLELSQYLRLGEGELKSGGFRRPSILADTVEALFGAV
FLDAGFDAARRVIVRQYQPVLASVDPKTLGKDAKTLLQEFLQGRKLALPVYTVVATHGAA
HSQQFEVECAIPALEIKVNAPGASRRAAEQSAAKLALEAAQAISPASKAARKSGKARKTA
QLSLPVAVSQETK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctagccacgctagaaaaccggctggatcatcacttcggtgatccagcactgctt
gaacaggcgctgacccaccgcagccatggtgcgcgccacaacgagcgcctggagttcctc
ggggattccgtgctcaacttcgtcgtcgcggcgatgctgttcgagcgttacgcgaaaatc
gacgagggcgatctgtcacgcctgcgcgccaacctggtcaagcaggcttcgctggcggac
atcgcccagcgcctggagctgtcccaatacctgcgcctgggcgaaggcgaactgaagagc
ggcggtttccgccggccgtcgatcctggccgatacggtcgaagccctgttcggcgcggtg
ttcctggacgctggtttcgacgctgcccgccgcgtgatcgtgcgccagtaccagccggta
ctggcctcggtcgaccccaagaccctgggcaaggacgccaagaccttgctgcaggaattc
ctgcaaggccgcaagctggccttgcccgtgtacaccgtggtggccacgcacggcgccgcc
cacagccagcagttcgaggtcgaatgcgccattccggcgctcgagatcaaggtgaacgcg
cccggcgccagccgccgcgcggccgagcagtcggccgccaagctggcgctggaggcggcg
caggccatcagcccggcgtccaaggccgcccgcaagtcgggcaaggcgcgcaagaccgcg
cagttgtcgctgcccgtggcagtgtcccaagagactaaatga
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