Achromobacter sp. HNDS-1: ABFG95_22520
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Entry
ABFG95_22520 CDS
T10763
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
achh Achromobacter sp. HNDS-1
Brite
KEGG Orthology (KO) [BR:
achh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
achh03016
]
ABFG95_22520 (truB)
Enzymes [BR:
achh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABFG95_22520 (truB)
Transfer RNA biogenesis [BR:
achh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABFG95_22520 (truB)
Prokaryotic type
ABFG95_22520 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XBO97627
UniProt:
A0AAU7L709
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All DBs
Position
4880674..4881423
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AA seq
249 aa
AA seq
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MAKRRGLALDGVLLLDKPVGLSSNHALQRAKRAMDAAKAGHTGTLDPFATGLLVCCMGRA
TKISGAMLDADKAYRATLQFGEETDSGDLTGNVVATAAPGFVVEEQALRDALSRFSGTIE
QIPPMYSALKRDGKPLYEYARQGIELERPPRQITIYRIELLSLNGTQAEIDVACSKGTYI
RTLAQDIGRALGCYAHLAALRRTHVGPFSLERAVALDALQAMPDPKQALLALNELPAGLL
PATTLKDSL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgacgcgggcttgcgctcgacggtgtgctgttgctcgacaaacccgtaggt
ttgtcgagcaaccacgcgctgcaacgcgccaagcgtgccatggacgcggccaaggccggc
cataccggcaccctcgaccccttcgccaccggcctgctggtgtgctgcatgggccgggca
accaagatttccggcgcgatgcttgacgccgacaaggcctatcgcgctacgctgcaattt
ggcgaggaaaccgattcgggcgacctgaccggcaacgtggtggctaccgccgcgcccggc
ttcgtggtcgaggaacaggcgctgcgcgatgcgctgtcacgtttctcgggcacgatcgag
cagattccgcccatgtattcggcgcttaagcgcgacggcaagccgttgtacgaatacgcg
cggcagggcattgagctggaacgcccgccgcggcagattacgatttaccgcatcgagctg
ctgtccctgaacgggacgcaggcagagatcgatgtggcttgcagtaaaggcacatacatc
cggacgctggcccaggacatcgggcgcgcgctgggctgttacgcccacctggcggcgctg
cggcgcacgcacgtcgggccattttctctggaacgcgccgttgcgctggatgccttgcag
gcgatgccagacccgaagcaggcattgcttgcactgaacgaattgccggcgggcttgctg
cccgccaccaccttaaaggactcgctatga
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