Achromobacter sp. HNDS-1: ABFG95_23630
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Entry
ABFG95_23630 CDS
T10763
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
achh Achromobacter sp. HNDS-1
Pathway
achh03030
DNA replication
achh03430
Mismatch repair
achh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
achh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABFG95_23630 (dnaE)
03430 Mismatch repair
ABFG95_23630 (dnaE)
03440 Homologous recombination
ABFG95_23630 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
achh03032
]
ABFG95_23630 (dnaE)
03400 DNA repair and recombination proteins [BR:
achh03400
]
ABFG95_23630 (dnaE)
Enzymes [BR:
achh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABFG95_23630 (dnaE)
DNA replication proteins [BR:
achh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABFG95_23630 (dnaE)
DNA repair and recombination proteins [BR:
achh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABFG95_23630 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
XBO97838
UniProt:
A0AAU7L7Q0
LinkDB
All DBs
Position
5111799..5115290
Genome browser
AA seq
1163 aa
AA seq
DB search
MSEAVTTPSPFVHLRVHSEFSVVDGIVRIPDLIKRVAKLGQPAVALTDLSNLFGLIKFYK
GARGAGIKPIAGCDVWLSNDEDPAKPFRVLLLVRNHQGYLNLCELLSRAFLTNQGKGRAE
IRREWLQGQDGLIVLSGGRGGDVGQALDAGNAVSALALARQWAHMFPGSYYIELQRAGMD
GDEAYTQAAMRLAGEAGLPVVATHPVQFLDEYEFQAHEARVCIAEGEILANPRRVRRFTK
EQYLLSSEEMARRFADVPSALANTVEIAKRCNLSLVLGKPRLPNFPTPDGVSLDDYLVQL
SEEGLEKRMAFLFPDEAERESKREQYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNNG
VPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERVI
DYVKEKYGRAAVSQIATFGTLGAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPMDPWTLER
TLKDEPAFKDRYEQEEEVRALVDLAKPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPG
QENSAVSQFDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRQFNEDKRDFDVMALSLDDP
AAYKILCDANTTAVFQLESRGMKELLKKLRPNTFEDIIAMLALYRPGPLESGMVDDFVNR
KHGRAAVDYFHNDLESTLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEE
MAKHRELFEKGAKEKGHDPDLAVKLFDLMEKFAGYGFNKSHSAAYALISYQTAWLKAYHP
TEFLAATMSSDMDDTDKVQIFCRDAQDNGVEVLPPDVNFSGYRFEPVADRYTEKGKPPRT
MRYGLGAVKGTGQGAVEDILRARKEGGPFQNLFDFCRRVSKHAVNRRTIEALIKAGAFDT
IEPNRAAMLASVPTAMEAAEQAARSANQSSLFGDDSSDVVAGELAKVAPWDLHKKLTEEK
SALGYYYSGHLFDAWRDEVRQIVPMQLARVEPQRDLQWMCGVLASVRVMMTRRGKMVFAV
LDDGTAQVEISVFNELYEKHRNRLREDQLVIVQGKVSNDDYSGGMRIVAEQLYDLQLARE
ARAKSLRVKLNGGADAARLRQMLNPFRAEPENGIPGVPVDIVYTKNNFLCTVRLGEEWRV
RMADTLLENLNAWTKPNGVEVTY
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagccgtaacaaccccgtccccatttgtccacctgcgtgtccactccgagttc
tcggtggtggacggcatcgtgcgcatccccgacctcatcaagcgcgtggccaagctgggc
cagcccgcggtcgccctgaccgatctgtcgaacctgttcggcctgatcaagttctacaag
ggcgcgcgcggcgcgggcatcaagcccatcgccggctgcgacgtctggctgagcaacgac
gaagatcccgccaagccgttccgcgtgctgctgctggtgcgcaaccaccagggctacctg
aacctgtgcgaactgctgtcgcgcgcgttcctgaccaaccagggcaagggccgcgccgaa
atccgccgcgaatggctgcagggccaggacggcctgatcgtgctgtcgggcggccgcggc
ggcgacgtcggccaggcgctggacgccggcaacgcggtgtcggcgctggcactggcgcgc
cagtgggcgcatatgttcccgggcagctactacatcgagctgcagcgcgccggcatggac
ggcgacgaagcctacacccaggccgccatgcgcctggcgggcgaggccggcctgccggtg
gtggccacccacccggtgcagttcctggacgaatacgaattccaggcgcacgaggcccgt
gtctgcatcgccgaaggcgagatcctggccaatccgcgccgcgtgcgccgcttcaccaaa
gagcaatacctgctcagttccgaagaaatggcgcgccgcttcgccgacgtgccctcggcg
ctggccaacacggtcgagatcgccaagcgctgcaacctcagcctggtgctgggcaagccg
cgcctgccgaatttccccacgcccgacggcgtgtcgctggacgactacctggtgcagttg
tccgaagagggcctggaaaagcgcatggccttcctgttcccggacgaggccgaacgcgaa
tccaagcgcgagcagtactacgagcgtctgcgctgggaatgcaagaccatcatccagatg
ggcttcccgggctacttcctgatcgtgcaggacttcatcaactggggcaagaacaacggc
gtgccggtcggcccgggccggggttcgggcgccggttcgctggtggcgtacgcgctgggc
atcaccgaccttgacccgatccgctacgacttgctgttcgagcgcttcctgaaccccgag
cgggtctcgatgcccgacttcgatatcgacttctgccaggacaaccgcgaacgcgtcatc
gactacgtcaaggaaaagtacggccgcgccgccgtgagccagatcgccaccttcggcacg
ctgggcgccaaggccgtggtgcgcgacgccggccgggtgctggacatgccctacatgttc
tgcgacggcctgtccaagctgatcccgttcaatccgatggatccgtggacgctcgaacgc
accctgaaggacgagccggccttcaaggaccgctatgagcaggaagaggaagtgcgcgcg
ctggtcgacctggccaagccgctcgaaggcctgacccgcaacatcggcatgcacgccggc
ggcgtgctgatcgcgcccggcaagctcaccgacttctgcccgctgtattgccagccgggg
caggaaaacagcgccgtctcgcagttcgacaaggacgacgtcgaagccgccggcctggtc
aagttcgacttcctggggctgcgcaacctgaccatcctggactgggccgtgcgctacgtg
cgccagttcaacgaggacaagcgcgacttcgatgtcatggcgctcagcctcgacgatccg
gccgcctacaagatcctgtgcgacgccaacaccaccgccgtattccagctggaatcgcgc
ggcatgaaggaactgctcaagaagctgcggcccaacaccttcgaagacatcatcgccatg
ctggccctgtaccgtccggggccgctggaatcgggcatggtggacgacttcgtcaaccgc
aagcacggccgtgccgcggtggactacttccacaacgatctggagagcacgctcaagagc
acctacggggtcatcgtctaccaggaacaggtgatgctgatctcgcagatcatcggcggc
tactcgctgggcggcgccgacctgctgcgccgcgccatgggcaagaaaaagcccgaggaa
atggccaagcaccgcgagctgttcgagaagggcgccaaggaaaagggccacgatccggat
ctcgcggtcaagctgttcgacctgatggagaagttcgcgggctacggcttcaacaagtcg
cactcggccgcgtacgcgctgatctcgtaccagaccgcctggctcaaggcctaccatccg
accgagttcctggccgccaccatgtcctccgacatggacgacaccgacaaggtccagatc
ttctgccgtgacgcccaggacaacggcgtcgaggtgctgccgcccgacgtcaacttctcg
ggctaccgcttcgagccggtggccgaccggtacaccgaaaagggcaagccgccgcgcacc
atgcgttacggcctgggggcggtcaagggcaccggccagggcgcggtcgaggacatcctg
cgcgcccgcaaggaaggcggcccgttccagaacctgttcgacttctgccgccgcgtcagc
aagcacgcggtcaaccgccgcaccatcgaggccctgatcaaggccggcgcgttcgacacc
atcgaacccaaccgcgccgccatgctggcttcggtgccgaccgccatggaagcggccgag
caggccgcccgcagcgccaaccagtcctcgctgttcggcgacgacagcagcgacgtggtg
gccggcgagctggccaaggtggcgccgtgggacctgcacaagaagctcaccgaggaaaaa
tcggcgctgggctattactacagcggccacctgttcgacgcctggcgcgacgaagtgcgc
cagatcgtgccgatgcagctggcgcgggtcgagccgcagcgcgacctgcaatggatgtgc
ggggtgctggccagcgtgcgcgtcatgatgacgcgccggggcaagatggtgttcgcggtg
ctggacgacggcaccgcgcaggtcgagatctcggttttcaacgaactctacgaaaagcac
cgcaaccgcctgcgcgaagaccagctggtcatcgtccagggcaaggtcagcaacgatgac
tattcgggcggcatgcgcatcgtcgccgagcaactgtacgacctgcaactggcgcgcgag
gcgcgcgccaagtcgctgcgcgtcaagctcaatggcggcgccgacgccgcgcgcctgcga
cagatgctcaacccgttccgcgccgagcccgagaacggcatccccggcgtgccggtggac
atcgtctacaccaagaacaatttcctctgcacggtgcggctgggcgaggaatggcgcgtg
cgcatggccgacacgctgctcgagaacctgaacgcctggaccaagccgaatggcgtggag
gtcacgtactga
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integrated database retrieval system
