Acinetobacter chinensis: CDG60_14825
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Entry
CDG60_14825 CDS
T06795
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
achi
Acinetobacter chinensis
Pathway
achi02020
Two-component system
achi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
achi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CDG60_14825
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CDG60_14825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achi03021
]
CDG60_14825
Transcription machinery [BR:
achi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CDG60_14825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Arg_repressor
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AXY57724
UniProt:
A0A3B7M0M1
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All DBs
Position
complement(2929554..2931008)
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AA seq
484 aa
AA seq
DB search
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDLSTIESLS
SLKESEAEQKDLTNELNADHLPDDLPVDTDWDDVYTHQPTSLGAAEYEEREDNRQGHQSL
QAHMLEQINLLHFSLVEQLIARCIVDSLDNKGFLDCEISEITSSVQHLLNTMGYEEEIED
DEVQVVLKHIQRLEPVGVGSRNLAECLLVQLEGLPAQLPYRYEAVLLMKHYELLVSNDIQ
KLMKQTGLNADQLKSAVELLKTLKAHPGIEFEDRESDYQIPDVVVMKKNEHWFVQLNPDV
VPKLRVNAFYAGMIRRADQSDDNQYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKG
FLETGPEGMKPLVLRDIAEEVELHESTVSRVTTNKYMLTPRGLFELKYFFSSHVGTTSGG
EASSTAIRAKIKKLIAEENIRKPLSDNTIAGMLKEEGIDVARRTVAKYRESLHIPSSSDR
KVLI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatcggttgggttaaaagttgcaaactctttgtcactgacaccgcagttacaa
caggccattcgtttgcttcaactttccagccttgagctggaacaggaaattcagattcag
ctggacagtaatccattactggagaaggttgaggatttatccactattgaaagtttatcc
tcattaaaagaaagcgaagcagaacagaaagatctgacaaatgaattaaatgcagatcat
ttacctgatgatttacctgtagatacagactgggatgatgtgtatacccatcagccaaca
agtttaggggctgctgaatacgaggagcgtgaagataaccgtcaggggcatcagagttta
caggcgcatatgcttgagcagattaatttgctgcatttttcactggtcgagcaattgatt
gcccgctgtatagtggattcactggataataaaggctttcttgattgtgagatttcagaa
ataacctcatcggttcagcacctgctgaatactatggggtatgaagaagaaatagaagat
gatgaagttcaggtggtcctcaaacatatacagcggctggaacctgtcggggtaggctcc
cgtaatcttgcagaatgtctgctggttcagctggaaggattgcctgcgcaacttccatat
aggtatgaagctgtacttttgatgaaacattatgaactgctggtttcaaatgatattcag
aagttgatgaaacagactggtttaaatgctgatcagttgaaaagcgcagttgaactgctc
aaaacattgaaagcacatccaggaattgaatttgaagaccgtgagtctgattatcagatt
cctgatgtagtggttatgaaaaaaaatgagcactggtttgtacagttgaatcctgatgtt
gttccaaagctgagagtgaatgctttctatgctggaatgatccgacgggcagatcaaagt
gatgataatcagtatttaagaaatcagatgcttgaagctaaaaactttataaaaagcata
gatgagcgacataagacgctgttaaaagtagcaacctgtattgtcgagcatcagaaaggg
tttcttgaaactggacctgaggggatgaagccgctggtattaagagatattgctgaagaa
gtggaacttcatgaatcaactgtttcgagggtcacaaccaataaatatatgctgactcca
cgcggactgtttgaactgaaatatttcttttcgagtcatgtagggacaacttcgggtggt
gaagcctcctcaacagcaatccgtgcaaaaattaaaaaactgattgctgaggagaatatc
cgtaagccattgtcagataatactattgccggaatgttaaaggaggaagggattgatgtt
gcaagacggacagtcgcgaagtatcgcgaatcgttacatattccttcatcttctgataga
aaagtcttgatctga
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