Achromobacter sp. JD417: LN047_00495
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Entry
LN047_00495 CDS
T11120
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
achj Achromobacter sp. JD417
Pathway
achj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LN047_00495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achj03021
]
LN047_00495
Transcription machinery [BR:
achj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LN047_00495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
HTH_23
Sigma70_r4
HTH_38
HTH_29
HTH_7
PhyR_sigma-like
HTH_40
HTH_28
HTH_IclR
HTH_24
HTH_20
Motif
Other DBs
NCBI-ProteinID:
XGB27823
LinkDB
All DBs
Position
101301..101828
Genome browser
AA seq
175 aa
AA seq
DB search
MSAKPSASPDAGISTIYRDHHSWLHGWLRLKLGDAHRAADLAQDTFVRLLSANSSTQTET
ALREPRAYLRTIANRLLVDHWRRQEIERNYLAVLQTYPQQHWPSEESRLVILESLEQIAQ
MLGRLRPGVREVFLLAQMEGHTCPQIARQVGKSVATVERYLAQALQHCYRLVYEC
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaagcccagcgccagtcccgacgccggtatctcgacgatttaccgtgaccac
cattcctggctgcatggctggctgcgcctgaagcttggcgacgcacaccgcgcggcggat
ctggcgcaggacacgtttgtccgcctgctctcggccaattcctccacccagaccgaaacc
gccctgcgcgaaccgcgcgcctatctgcgcaccatcgccaaccgcttgctggtggaccat
tggcgccgccaggaaatcgagcgcaattacctggcggtgttgcagacctatccccaacaa
cattggccgtccgaagagtcgcgcctggtgatcctggaatcgctggagcagatcgcgcag
atgctgggccggttgaggcccggggtgcgcgaagtgttcctgctggcgcagatggagggc
catacctgcccgcagatcgcgcggcaggtgggcaagtcggtggcgacggtggagcgttat
ctggcgcaggccctgcaacactgctatcgcctggtttatgagtgctga
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