Achromobacter sp. JD417: LN047_01790
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Entry
LN047_01790 CDS
T11120
Name
(GenBank) SelB C-terminal domain-containing protein
KO
K03833
selenocysteine-specific elongation factor
Organism
achj Achromobacter sp. JD417
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
achj03012
]
LN047_01790
Translation factors [BR:
achj03012
]
Eukaryotic type
Elongation factors
LN047_01790
Prokaryotic type
LN047_01790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_2nd_SelB
WHD_3rd_SelB
GTP_EFTU_D2
WHD_2nd_SelB_bact
DUF5817_CT
MMR_HSR1
SRPRB
NfeD
GTP_EFTU_D3
Motif
Other DBs
NCBI-ProteinID:
XGB28075
LinkDB
All DBs
Position
393858..395876
Genome browser
AA seq
672 aa
AA seq
DB search
MIVGTAGHIDHGKTTLVRALTGVDTDRLKEEKARGISIELGYAYTPLANGEVLGFIDVPG
HEKLVHTMAAGASGIDFGLLVVAADDGVMPQTREHLAILSMLGVGRGVVALTKTDRADAA
QLDRVRGEIEALVQGTFLQGAPVFGTSAVHAGQTTQAARPAQAVHSAQADSAAQSGDPGV
AALKDYLHAQAEAVARREATGLFRLAVDRVFTLSGHGTVVTGTAHAGQVRADDDTVDLRL
MPAGTRVRVRGIHAQNQPSETGSAGQRCALNLAGIDKSAISRGDWIADARGFLPSKHVDV
ALTLLPSADAPVRAWAPLHVHMGAARHVAHVVPISAESLQPGQSGWVQLVFDEPVCAMPG
DRFIVRNAQATRTVGGGRVLDPNAPDRKRRAASRLAGLQALSEMLDGGGLQPVLAHAPQG
LDEAALQRLTGRPVNEITTPAGARWIEPRHAQGSRTLILAPHWAALRERAEAALAAFHQG
APDEPGPDSARLRRMAMPAMPDTLWTSLLEELQGDGRIARNGPWLHLPSHTATLGQAESA
LAARLLPLLDEGAFDPPWVRDLARMQNVSEDAVRQLLRKLLRRGEVAQVVKDLFYHRDQV
RKLAALAADLAGQPQGLNAAVFRDATGLGRKRAIQILEFFNRVGYTRRVRDTHVLRGESA
YAAMQQRAEPVS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcggcaccgcggggcatatcgaccacggcaagacgacgcttgttcgggcgctg
acgggcgtggacacggaccggctgaaggaagagaaggcgcgcggcatttccattgaactg
ggctacgcctacacgccgctcgccaatggcgaggtgctgggtttcatcgacgtgcccggc
cacgaaaagctcgtgcacacgatggcggccggcgccagcggcatcgatttcgggctgctg
gtggtggcggcggacgacggtgtcatgccgcagacgcgcgagcatctggcgattctgtcg
atgctgggcgtggggcgcggcgtggtggcgctgaccaagacggatcgcgcggacgccgcg
caactggaccgcgtgcgcggcgagatcgaagcgttggtgcaaggcacgttcctgcaaggc
gcgccggtgtttggcacgagcgcggtccacgcgggccagacgacgcaggcggcgcggccg
gcgcaagcggtgcattcggctcaagcggattctgcggcgcagtcgggtgacccgggggta
gcggcgcttaaagattatctgcacgcgcaggccgaggcggtggcgcggcgcgaagccacc
ggtctctttcgattggcggtggatcgcgtgttcaccttgtccggccacggcacggtggtg
accggcacggcgcatgccggccaggttcgggcggacgacgacactgtcgatctgcggctg
atgccggccggcacgcgggtgcgggtgcgtggcatccatgcgcagaatcagcccagcgag
acgggctcggccgggcagcggtgcgccttgaacctggcgggcatcgacaagagcgccatc
tcacgcggcgactggatcgcggacgcgcgcggcttcctgccctcgaagcacgtggatgtg
gcgctgacgctactgccgtcggcagatgcgccggtgcgggcctgggcgccgctgcacgtg
catatgggcgcggcgcgccacgtggcgcatgtggtgccgatcagtgcggagtcgctgcag
ccggggcagtcggggtgggtgcaactggtgtttgacgagccggtctgcgcgatgccgggt
gatcgcttcatcgtgcgcaatgcgcaggcgacgcgcacggtgggcggcggccgggtgctg
gatccgaatgcgccggaccggaagcgccgcgcggcgtcgcggctggcggggttgcaggcg
ttgtccgagatgctggatggcggcggtttgcagccggtgctggcgcacgcgccgcagggc
ctggatgaggccgcactgcagcggctgacgggccggccggtcaatgagatcacgacgccg
gcgggcgcgcgctggatcgagcctcgccatgcgcagggatctcgcacgctgatcctggcg
ccgcattgggcggcgctgcgcgagcgggccgaagcggcgctggcggcgtttcaccagggc
gcgccggacgaaccgggtccggacagcgcgcggctgcggcgcatggcaatgccggcgatg
ccggacacgctctggacgtcgctgctggaagaactgcaaggcgacggccgcatcgcgcgc
aatggtccgtggctgcatctgccatcgcatacggcgacgctgggacaggccgaatcggcg
ctggcggcgcggctgttgccgctgctggatgagggcgcattcgatccgccgtgggtgcgc
gatctggcccggatgcagaacgtctccgaggacgcggtgcgccagttgctgcgcaagctg
ttgcggcggggggaagtggcgcaggtggtgaaggatcttttctatcaccgcgatcaggtg
cgcaagctggcggcgctggcggcggacctggcggggcagccgcaaggactgaatgcggcg
gtgttccgggacgcgacagggctgggccgcaagcgggcgatccagatcctggagttcttc
aatcgggtgggctatacgcggcgcgtgcgggatacgcatgtgctgcggggcgaaagcgcc
tatgcagccatgcagcagcgcgccgagccggtatcatag
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