Achromobacter sp. JD417: LN047_01845
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Entry
LN047_01845 CDS
T11120
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
achj Achromobacter sp. JD417
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
achj03000
]
LN047_01845
Transcription factors [BR:
achj03000
]
Prokaryotic type
Helix-turn-helix
Other families
LN047_01845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
HTH_23
Mg_chelatase
HTH_29
AAA_2
HTH_28
AAA_3
AAA
HTH_50
HTH_IclR
HTH_1
HTH_3
HTH_Tnp_ISL3
P22_Cro
RsmI_C
TsaE
HTH_38
HTH_22
Motif
Other DBs
NCBI-ProteinID:
XGB28085
LinkDB
All DBs
Position
403838..405754
Genome browser
AA seq
638 aa
AA seq
DB search
MASYSRRQTLTQARLLFNQQGAVPGGMVAEPILRSWRRCADLGFDMRGVRRAELMTQSEL
REAQQRNEALRRMSEPAIAYLRHQAGGSGNLVILSDAQGLVLDSDGDTGFAHRASRVALM
PGAPWDEAAAGTNAIGTALVEGRPIAVHGAEHYFEPNRILTCAAVPITDSEGRTVGVLDL
SSQARDVRPDVLALVRGAVDRIEHQLFEGAYEQCTVLRLHADLAGLGQPGEALLAFQGDL
LVGANRRALHALGLAATALGVYRYADVFDGDIGRGPDAAGRVHTRTGAVYHARLRMPRTR
PPKPPATPALRAPGAAAKMPAPSFDAATLGALARAVHLADAGVSILLQGETGVGKEVFAR
QIHARGQRAAGPFVAVNCAALPESLIESELFGYEEGAFTGARRQGSKGLLRQAHGGVLFL
DEIGDMPLLLQSRLLRVLQTREVSPLGAARPIAVDFTLVCATHRPLAHEGPDAPVRPDLY
FRIAEYTVTLEPLRARADRLELLRDLWAAQGAGPALPPAIEAVLAAYSWPGNYRQLASVL
RTLHVLAGPAGGVDADMLPAELRGAASVAKREIPAPGAATSTPAPAGAAGDLHAMTDAAI
RSALEAHGGSVSRAARALGVHRSTVYRRASALGLARPK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttactcccgtcggcagacgctgacgcaggcacggctgctttttaaccagcag
ggcgcggtgccgggcggcatggttgccgaaccgatcctgcgttcctggcgccgctgcgcc
gacctgggctttgacatgcgcggcgtgcgccgcgccgaactcatgacgcagagcgaactg
cgcgaagcgcagcagcgaaacgaagcgctgcgccgcatgtccgaacccgccatcgcgtat
ttgcgccaccaggcgggcggcagcggcaacctggtcatcctgtcggacgcgcagggcctg
gtgctggactcggacggcgacacgggctttgcgcatcgcgcctcgcgcgtggccctgatg
ccgggcgcgccctgggacgaggccgccgccggcaccaacgccatcggcaccgcgctcgtc
gaaggccgtccgattgccgtgcatggcgcggaacactatttcgaacccaatcgcatcctg
acctgcgcggccgtgcccatcacggacagcgaaggccgcaccgtgggcgtgctggatctg
tccagccaggcccgcgacgtgcgtccggatgtgctggcgctggtgcgcggggcggtggac
cgcatcgaacaccagctgttcgaaggcgcctatgaacaatgcacggtgctgcgcctgcat
gccgacctcgcggggctgggtcagcccggcgaagcgctgctcgcatttcagggcgacctg
ctggtcggcgccaaccgccgtgcgctgcatgcgctggggctggcggccactgcgctaggc
gtgtaccgctacgcggacgtgttcgacggcgatatcggacgtggcccggatgccgcgggc
cgcgtgcacacgcggaccggcgcggtctatcacgcgcgcctgcgcatgccgcgcacgcgc
ccgcccaaaccccccgccaccccggcgctgcgtgcgcccggcgccgccgccaagatgccc
gcgcccagctttgacgccgccacgctaggggccctggcgcgcgccgtgcacctggcggac
gcgggcgtgtcgattctgctgcagggcgaaaccggggtgggcaaggaggtgttcgcgcgg
cagatccatgcgcgcggccagcgggccgccgggcccttcgtggcggtgaactgcgccgcg
ctgcccgagagcctgatcgaatcggaactcttcggctacgaggaaggcgccttcaccggt
gcgcgccgccagggcagcaagggcctgctgcggcaggcgcacggcggcgtgctgttcctg
gacgagatcggcgacatgccgctcctgttgcaatcgcgcctgttgcgcgtgttgcagacg
cgcgaggtctcgcccttgggcgcggcgcggcccatcgcggtggatttcacgctggtgtgc
gcgacgcatcggccgcttgcccatgaaggtccggacgcgccggtgcggcccgacctgtac
tttcgcatcgccgaatacaccgtcacgctggagcccttgcgcgcgcgggccgaccgcctg
gaattgctgcgcgatctgtgggcggcgcagggcgccggtccggcgctgccgcctgccatc
gaagccgtcctcgcggcgtattcgtggccgggcaattaccgtcagctggcgtccgtgctg
cgcaccctgcatgtgctggccgggccggcgggcggggtggatgccgacatgctgccagcg
gaattgcgcggtgcagcgagcgtcgcgaagcgggagatacccgcgccgggcgccgcaacg
tcaacgcccgcgccggccggtgcagccggcgacctgcacgccatgaccgatgccgccatc
cgcagcgccctcgaggcgcacggcggcagcgtcagccgcgcggcgcgcgcgctgggcgtg
caccgcagcacggtgtaccggcgcgcttccgcattggggctggcgcggccgaaataa
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