Achromobacter sp. JD417: LN047_07305
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Entry
LN047_07305 CDS
T11120
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
achj Achromobacter sp. JD417
Pathway
achj03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LN047_07305 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
achj03011
]
LN047_07305 (rpsA)
Ribosome [BR:
achj03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LN047_07305 (rpsA)
Bacteria
LN047_07305 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Cofilin_ADF
Head_fiber_dimeric
Motif
Other DBs
NCBI-ProteinID:
XGB29112
LinkDB
All DBs
Position
1600501..1602213
Genome browser
AA seq
570 aa
AA seq
DB search
MSSVSTTATGGESFADLFAQSLKSQDMKSGEVISAEVVRVDHNFVVVNAGLKSEALIPLE
EFLNDQGELEVQPGDFVSVAIDSLENGYGDTILSRDRAKRLSAWLQLEKALENGELVTGT
ITGKVKGGLTVMTNGIRAFLPGSLVDLRPVKDTTPYEGKTLEFKVIKLDRKRNNVVLSRR
QVLEASMGEERQKLLETLHEGAVVKGVVKNITDYGAFVDLGGIDGLLHITDMAWRRVRHP
SEVLQVGQEVEAKVLKFDQEKSRVSLGVKQLGEDPWVGLARRYPQGTRLFGKVTNLTDYG
AFVEVEAGIEGLVHVSEMDWTNKNVDPRKVVTLGEEVEVMVLEIDEDRRRISLGMKQCRQ
NPWEEFATNFKRGDKVRGAIKSITDFGVFVGLPGGIDGLVHLSDLSWTEAGEEAVRNFKK
GDEIEAVVLGIDTDKERISLGIKQLEGDPFNNFVATFDKGAVVPGTIKSVEAKGAVVTLS
VDVEGYLRASEISSGRVEDATTVLSAGENIEAMIVNIDRKTRSIQLSIKARDNAETADTI
QRMSDASASSGTTNLGALLKAKLDQQRNDG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgtttccactaccgccaccggcggcgaaagcttcgccgaccttttcgcacaa
agcctcaagagccaggacatgaagtccggcgaggtcatcagcgccgaagtcgtgcgcgtc
gaccacaatttcgtcgtcgtcaacgccggcctgaagtccgaagcgctgatccccctggaa
gagttcctgaacgaccagggcgagctcgaagtgcaacccggcgatttcgtctcggtggcc
atcgattccctggaaaacggctacggcgacaccatcctgtcgcgtgaccgcgccaagcgc
ctgtcggcctggctgcaactggaaaaggccctggagaacggcgaactggttaccggcacc
atcaccggcaaggtgaagggcggtctgaccgtcatgaccaacggcatccgcgcgttcctg
ccgggttcgctggtggatctgcgtccggtcaaggacaccaccccgtacgaaggcaagacc
ctcgaattcaaggtcatcaagctcgaccgcaagcgcaacaacgttgtgctgtcgcgtcgc
caggtgctggaagccagcatgggcgaagagcgtcaaaagctgctcgaaaccctgcacgaa
ggtgccgtggtcaagggcgtggtcaagaacatcaccgactacggcgcgttcgtcgacctg
ggcggcatcgatggcctgctgcacatcaccgacatggcctggcgccgtgtgcgtcacccc
tccgaagtcctgcaagtgggtcaggaagtcgaagccaaggtcctcaagttcgaccaggaa
aagagccgcgtctccctgggcgtcaagcagcttggcgaagatccgtgggtgggcctggct
cgccgctacccgcaaggcacccgcctgttcggcaaggtcacgaacctgaccgactacggc
gcgttcgttgaagtcgaagccggcatcgaaggcctggtccacgtgtccgaaatggactgg
accaacaagaacgtcgacccgcgcaaggttgtgaccctgggcgaagaagtcgaagtcatg
gtcctggaaatcgacgaagaccgtcgccgcatttcgctgggcatgaagcagtgccgccag
aacccgtgggaagagttcgccacgaacttcaagcgtggcgacaaggtccgcggcgccatc
aagtcgatcaccgacttcggcgtgttcgtcggcctgcccggcggcatcgacggcctggtc
cacctgtccgacctgtcgtggacggaagctggcgaagaagccgtgcgcaacttcaagaag
ggcgacgaaatcgaagccgtggttctgggcatcgacaccgacaaggaacgcatctcgctg
ggcatcaagcagctggaaggcgaccccttcaacaacttcgtcgccacgtttgacaagggc
gccgtggttccgggcaccatcaagtcggtcgaagccaagggcgccgtggttacgctgtcc
gtggacgtcgaaggctacctgcgcgcttccgagatctcctcgggccgcgtcgaagatgcc
accaccgtgctgtccgccggcgagaacatcgaagccatgatcgtcaacatcgaccgcaag
acgcgttcgatccagctgtcgatcaaggcccgcgacaacgccgaaaccgccgacacgatc
cagcgcatgtccgacgccagcgcttcgtccggcaccaccaacctcggcgcgctgctgaag
gccaagctggaccaacagcgcaacgacggttaa
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