Achromobacter sp. JD417: LN047_07330
Help
Entry
LN047_07330 CDS
T11120
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
achj Achromobacter sp. JD417
Pathway
achj00541
Biosynthesis of various nucleotide sugars
achj01100
Metabolic pathways
achj01250
Biosynthesis of nucleotide sugars
Module
achj_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LN047_07330 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
achj01005
]
LN047_07330 (rfaD)
Enzymes [BR:
achj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LN047_07330 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
achj01005
]
Core region
LN047_07330 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
XGB29117
LinkDB
All DBs
Position
1605299..1606288
Genome browser
AA seq
329 aa
AA seq
DB search
MIVVTGAAGFIGSNLVRGLNRRGIEDIIAVDDLTEGDKFVNLVDCKIADYMDKDDFRRRV
ADGSLPDIRAVLHQGACSDTTERNGRYMLDNNYRVTLELFEFCQTRRVPFLYASSAAVYG
GSTTYVEHPDNEGPLNVYGYSKLLFDQVLRKRMGSLTAQVVGLRYFNVYGPHEQHKGRMA
SVAFHNMNQFLEHGHVRLFAGWDGYVDGGQSRDFISVEDVVAVNLHFLDHPEQSGIFNCG
TGKAQPFNDVAAAVVNTLRAERGEAELTLAQLAELDLIRYIPFPDDLKGRYQSYTQADVT
QLRAAGFTAPMRDVQTGVAEYVRYWRARK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgttaccggagccgcgggcttcattggcagcaacctggttcgcgggctcaac
cgccgcggcatcgaagacatcattgccgtcgatgatctgaccgaaggcgacaagttcgtc
aatctcgtcgattgcaagatcgccgactacatggacaaggacgactttcgccgccgcgtc
gccgacggcagcctgcccgatatccgcgcggtgctgcatcagggcgcgtgttcggacacc
accgagcgcaacggccgctacatgctggacaacaactaccgcgtcacgctggaactcttc
gagttctgccagacgcgccgcgtgccgttcctgtatgcgtcctccgcggccgtgtacggc
gggtcgacgacctacgtcgagcatcccgacaacgaaggcccgctgaacgtctacggctat
tccaagctgctgttcgaccaggtgctgcgcaagcgcatgggcagcctgacggcgcaagtc
gtcggcctgcggtatttcaacgtgtatggcccgcacgagcagcacaaaggccgcatggcg
tcggtggccttccacaacatgaaccagttcctggaacacgggcacgtgaggctcttcgcg
ggttgggacggctacgtggatggcggccagagccgcgatttcatctcggtcgaagacgtg
gtcgcggtgaacctgcatttcctggatcatcccgaacaatccggcatcttcaactgcggc
accggcaaggcgcagccgttcaatgacgtggcggccgcggtggtcaacacgctgcgcgcc
gagcgtggcgaggccgagctgacgctggcgcagttggccgaactggacctgatccgctac
atcccgttcccggacgacctcaagggccgctaccaaagctacacgcaggccgatgtcacg
cagcttcgcgccgccggcttcacggcgcccatgcgcgatgtgcagacgggcgtggccgaa
tacgtgcgctactggcgcgcccgcaagtaa
DBGET
integrated database retrieval system
