Achromobacter sp. JD417: LN047_07455
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Entry
LN047_07455 CDS
T11120
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
achj Achromobacter sp. JD417
Pathway
achj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LN047_07455 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achj03019
]
LN047_07455 (orn)
03009 Ribosome biogenesis [BR:
achj03009
]
LN047_07455 (orn)
Messenger RNA biogenesis [BR:
achj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LN047_07455 (orn)
Ribosome biogenesis [BR:
achj03009
]
Eukaryotic type
Pre-60S particles
RNases
LN047_07455 (orn)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
XGB29141
LinkDB
All DBs
Position
1632463..1633008
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AA seq
181 aa
AA seq
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MAANENRLIWLDMEMTGLDPEKERIIEVAVVVTEPDLTVVAEGPVIVVHQSDSLLDAMDN
WNKSTHGKSGLIDKVKASTVSEAQAEDTLLAFLAQHVPAGKSPMCGNTIGQDRRFMFAYM
PRLEQFFHYRNLDVSTLKELARRWAPAVYKGFEKKSRHEALADIYESIDELKYYREHFLK
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaacgaaaaccgcctgatctggctcgacatggaaatgacggggctggacccc
gagaaagaacggattatcgaggtcgccgtcgtggtgaccgagcctgacctgacggtcgtc
gccgaagggccggtgatcgtggtgcaccagtccgacagcctgctcgacgccatggacaac
tggaacaaatccacccacggcaaaagcgggctcatcgacaaggtcaaggcctccacggtg
tccgaggcgcaggcagaggatacgctgttggcgttccttgcgcagcatgtgccggccgga
aaatcgccgatgtgcggcaacaccatcggccaggaccgccgtttcatgtttgcgtacatg
ccgcgcctggaacagttcttccattaccgcaacctggacgtcagcacgctcaaggagctg
gcgcgccgttgggcccccgccgtctacaagggattcgagaaaaagagccgccacgaagcg
ctggccgacatctacgagtccatcgacgaactcaagtattaccgcgagcatttcctgaag
gtctga
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