Achromobacter sp. JD417: LN047_07610
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Entry
LN047_07610 CDS
T11120
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
achj Achromobacter sp. JD417
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
achj03009
]
LN047_07610
Enzymes [BR:
achj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LN047_07610
Ribosome biogenesis [BR:
achj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LN047_07610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
XGB29167
LinkDB
All DBs
Position
1659489..1661375
Genome browser
AA seq
628 aa
AA seq
DB search
MTTNTAIQDDTPRSDDAVAGAPESSGAREPAAEGDAGARGRGRKLRTPFRRRRGDAAAEQ
APAAEGQAAAPAAPVESADSRGGEQEAEQALSYLDTADRMEQRLGKYLNSEAVMPKLHKV
LADAGIGSRREMEELIVAGRVSVNGEPAHIGQRVGPNDQVRVNGKPIMRANTKKPPRVIL
YHKPAGEIVSHDDPGGRASVFARLPKLRTGKWLSVGRLDLNTEGLLIFTTSGDMANRIMH
PRYGTEREYAVRVLGEMDEAQRQSLVDGIELEDGLAAFGALDYLGGDGSNRWYRVTLQEG
RNREVRRMFEAVGVTVSRLIRTRFGDVVLPRTLRRGRWDELDASLVTALMVQLGLLRDDD
DSSGNRRRSKQPQSHDSALPPGFGTLDRNGMNGARIGRRGKLQGGGVGSAGQAAACPSDP
FGTGLMIAGGYANGHPLSGEGGFGNRKGKPGSRPAGAGKPGGKAGGKSGGKAGGRSGGNA
RGPRAAANAGPGNPMASSPAGGNVAGVNPAVGGMAEAPAGAGRRPGGKSGGKPGGGKPGG
NKPAGARGGNAARGGKPAAGGRGGNKAEGARAGGNNKGPGAGGKPRTPRAGGARSEGGQR
GDDWQPRSASAHESRLGVVGGGRGRQGR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacgaatacagcaatacaggacgacaccccccgttcggatgacgccgttgccggc
gcgccggaatcctctggcgcgcgcgaaccggccgccgaaggcgatgccggcgcccgcggc
cgcggccgcaaactgaggacgccgttccgccgccgtcgtggcgatgccgccgccgagcag
gcccccgccgccgaaggccaggccgccgcgccggccgcgccggtcgagtccgcggactcc
cgtggcggcgagcaggaggccgaacaggccctgtcctacctggacacggctgaccgcatg
gaacagcgcctgggcaagtacctgaacagcgaagcggtcatgcccaagctgcacaaggtg
ctggccgacgccggcatcggctcgcgccgcgaaatggaagaactgatcgtggcgggccgc
gtgtccgtcaacggcgagccggcgcatattggccagcgcgtgggtcccaacgaccaggtg
cgcgtcaacggcaagcccatcatgcgcgccaacaccaagaagccgccgcgcgtgatcctg
tatcacaagcccgccggcgagatcgtcagccacgacgaccccggcggtcgtgccagcgtg
tttgcgcgtttgcccaagctgcgcaccggcaagtggctctcggtgggccgcctggacttg
aacaccgaaggcctgctcatcttcacgacgtcgggcgacatggccaaccggatcatgcac
ccccgttatggcacggaacgcgagtacgccgtccgtgtcctgggtgaaatggacgaagcg
cagcgccagtcgctggtggacggcatcgaactcgaagacggtctggccgcgttcggcgcg
ctggattatctgggcggcgacggcagcaaccgctggtatcgcgtcacgctgcaagaaggc
cgcaaccgggaagtgcgccgcatgtttgaagcggttggcgtcacggtcagccgcctgatc
cgtacgcgctttggcgatgtcgtgctgccgcgcacgctgcgccgtggccgctgggacgaa
ctggatgcgtctctcgtgaccgcgctgatggtgcaactggggctgttgcgtgacgacgac
gattcgtccggcaaccgccgccgctccaagcagccgcaatcgcatgacagcgcgctgccc
ccggggtttggcacgctggaccgcaatggcatgaatggcgcccgcatcgggcgccgcggc
aagctgcagggcggcggtgtgggcagcgcgggtcaggccgcggcgtgtccgtccgatccg
ttcggcaccggcctgatgattgctggcggctatgccaacggccatccgctctcgggcgag
ggcggcttcggcaatcgcaagggcaaaccgggttcgcggcccgctggcgccggcaagccc
ggtggcaaggcgggcggtaagtcgggcggcaaggcgggtggacgctcgggcggcaatgcc
cgtgggcctcgcgccgcagcgaacgccggcccgggtaatccgatggccagcagcccggcg
ggcggcaatgtcgcaggcgtgaacccggcggttggcggcatggcggaagcgccggctggc
gcgggccgcaggcccggcggcaagtccggtggcaagccgggcggcggcaagccgggcggc
aacaaaccggcaggcgcgcgcggcggcaatgcggcgcgcgggggcaagccggctgccggc
ggccgcggcggcaacaaggccgaaggcgcacgcgccggcggcaacaacaagggtcccggc
gcgggcggcaagccgcgcacgccgcgtgcgggcggcgcccgcagcgaaggcggtcagcgg
ggcgacgattggcagccgcgcagtgcgtcggcgcacgaatcccgcttgggtgtcgtgggt
ggcggccgcggacgccagggccgatga
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