Achromobacter sp. JD417: LN047_07620
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Entry
LN047_07620 CDS
T11120
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
achj Achromobacter sp. JD417
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achj03021
]
LN047_07620 (nusA)
03009 Ribosome biogenesis [BR:
achj03009
]
LN047_07620 (nusA)
Transcription machinery [BR:
achj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LN047_07620 (nusA)
Ribosome biogenesis [BR:
achj03009
]
Prokaryotic type
rRNA transcription factors
LN047_07620 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
VIT1
Motif
Other DBs
NCBI-ProteinID:
XGB29168
LinkDB
All DBs
Position
1662355..1663833
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AA seq
492 aa
AA seq
DB search
MSREILLLVDALAREKNVTRDVVFGALESALASAMKKRFKDDADIRVSIDRETGDHEGFR
RWLVVPDEAGLQEPDKQEMLSDAEEIVPGIKEGEYIEEPLEPIEFGRIGAQAAKQAILQK
IRDAEREQVLNDFLDRGETIVSGTIKRMDKGDAIVETGKIEARLPRSEMIPKENLRVADR
VRAFVLRVDHAARGQQVILSRTSPEFIRQLFENEVPEIEQGLLEIKAAARDAGVRAKIAV
VAYDKRIDPIGTCVGMRGSRVTAVRNELGGEQVDIVLWSEDPAQFVIGALAPANVESIVV
DEDKHAMDVVVDEENLPKAIGAKGQNVRLASELTGWQINIMTPEESLNRQEVERSGLRTT
FMSKLDVDEEVADILIDEGFTGIEEIAYVPMQELLEIEAFDEDTINELRARARNALLTEA
IAQEERLETAQDLLELEGMTPELAAKLAERQVHTRDDLAELATDELAEIAGLTEQEASDL
IMRARAHWFDEE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcgaaattcttctgttggtcgatgccttggcgcgtgaaaagaacgtcacgcgt
gacgtcgtgttcggcgctctcgaaagtgcgctggcctcggccatgaaaaagcgcttcaag
gatgatgcggacattcgtgtttccatcgatagggaaacgggagaccacgaaggcttccgc
cgttggctggtcgtgcccgacgaggctggcctgcaagaacccgacaagcaggaaatgctg
tcggatgcggaggaaatcgtccccggcatcaaggaaggcgagtacatcgaagagcccctg
gagcccatcgaattcggccgcatcggcgcccaggccgccaagcaggcgatcctgcaaaag
atccgcgacgccgagcgcgaacaggtgctgaacgacttcctggaccgtggtgaaaccatc
gtctccggcacgatcaagcgcatggacaagggcgacgccatcgttgaaaccggcaagatc
gaagcgcgcctgccgcgctccgaaatgatccccaaggaaaacctgcgggttgccgatcgc
gtgcgcgccttcgtgttgcgtgtggaccacgccgcgcgtggccagcaggtcatcctgtcg
cgcacgtcgcccgagttcatccgccagctgttcgagaacgaagtgcccgagatcgagcag
ggtctgctcgagatcaaggctgctgcccgcgatgccggcgtgcgtgcgaagatcgccgtc
gtggcatacgataagcgtatcgatcccatcgggacgtgcgtcggcatgcgcggttcgcgc
gtgaccgccgtgcgcaacgaactcggcggcgagcaggtcgacatcgtgctgtggtcggaa
gaccccgcgcagttcgtcatcggcgcgctggcgccggccaacgtcgaatccatcgtcgtc
gatgaagacaagcatgcgatggacgtcgtggtggacgaggaaaacctgccgaaggccatc
ggcgccaagggccagaacgtgcgcctggcgtccgaactgaccggctggcagatcaacatc
atgacgccggaagaaagcctgaaccgccaggaagtcgagcgttcgggtctgcgcaccacg
ttcatgagcaagctggacgtcgacgaggaagtcgctgacatcctgatcgacgaaggattt
accggtatcgaggaaatcgcctacgtgcccatgcaggaactgctggaaatcgaggcgttt
gacgaagacaccatcaatgagttgcgcgcccgtgcccgcaatgcgctgctgaccgaggca
attgcccaggaagagcgccttgagaccgcacaggatctgctagaactcgaaggcatgacg
ccggaactggccgccaagctggccgagcgtcaagtgcatacgcgtgatgatctggccgaa
ttggcaacggacgaactggcggaaatcgccggtctgaccgaacaggaagccagcgatctc
atcatgcgtgcccgtgcccattggtttgacgaagaataa
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