Achromobacter sp. JD417: LN047_07635
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Entry
LN047_07635 CDS
T11120
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
achj Achromobacter sp. JD417
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
achj03016
]
LN047_07635 (truB)
Enzymes [BR:
achj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LN047_07635 (truB)
Transfer RNA biogenesis [BR:
achj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LN047_07635 (truB)
Prokaryotic type
LN047_07635 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XGB29171
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Position
1667453..1668205
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AA seq
250 aa
AA seq
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MAKRRGLALDGVLLLDKPVGLSSNHALQRAKRAMDAAKAGHTGTLDPFATGLLVCCMGRA
TKISGAMLDADKAYRATLQFGSETDSGDLTGNVTATAEPGFTVEEQALRDALSRFSGTIE
QIPPMYSALKRDGKPLYEYARAGIELERPPRQITIYRIELLSLTGTQAEIDVACSKGTYI
RTLAQDIGRVLGCFAHLTALRRTHVGPFSLERAVELEALQAMPDPKQALLALNELPEGLL
PSTLTLKDSL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgacgcgggcttgcgctcgacggtgtgctgttgcttgataaacccgtgggt
ttgtcgagcaatcacgccttgcagcgcgccaaacgcgccatggatgcggccaaggccggc
cataccggcacgctggacccctttgccaccggcttgctggtgtgctgcatgggtcgcgcc
accaaaatttccggcgcgatgcttgacgccgacaaggcatatcgcgctacgctgcaattt
ggatcggaaaccgattccggcgacctgacgggcaacgtcacggcgaccgccgaacccggt
tttaccgtcgaggaacaggcgctgcgcgacgcgctgtcacgtttctcgggcaccatcgag
cagattccgccgatgtactccgcgctcaagcgcgacggcaagccgctgtacgagtacgcc
cgcgcgggcatcgaactggagcggccgccgcgccagatcacgatataccgcatcgagctg
ttgtccctcaccgggacgcaggcagagatcgatgtggcttgcagtaaaggcacatacatc
cgaacactggcccaggacatcgggcgcgtgctgggctgtttcgcccacctgacggcgctg
cggcgcacgcacgtcgggcccttctctctggaacgcgccgttgaactggaagccttgcag
gccatgccagacccgaagcaggcattgcttgcactgaacgaattgccggagggcttgctg
ccctccaccctgaccttaaaggactcgctatga
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