Achromobacter sp. JD417: LN047_09405
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Entry
LN047_09405 CDS
T11120
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
achj Achromobacter sp. JD417
Pathway
achj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LN047_09405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
achj02000
]
LN047_09405
Transporters [BR:
achj02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LN047_09405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF3485
Motif
Other DBs
NCBI-ProteinID:
XGB29493
LinkDB
All DBs
Position
complement(2064929..2066506)
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AA seq
525 aa
AA seq
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MKSKNWFSLSIGALVLAAALPATQALAQTKGGTLNMIVQPEPPVIVTAINQQGPTQFVAG
KIYESLLTYSTDLKPQPGLAKSWEAAADGLTYTFHLQDNVKWHDGKPFTSEDVVFSLADM
LPKTHARARVILNKFVESVQAPDAKTVVIKLKTPFPAFMLMFEPGFAPMMPKHLYAGTDY
MTNPANQKPVGTGPFVFKEWKRGEYIKLARNPDYWKPGKPYLDELVFNVIPDAASRAVAF
ERGSVDVLRGGDVDNVDIKRLRGLPNVEYTTAGWEMFSPQAYLIFNMRKPPFDNLKVRQA
VMAAMNRNMVVNNIFFGLGKVSTSPFVTTEMFYDKNMPPMPFDMKKARALIKESGIKPGD
YTIRQLSFPYGSTWDRLGEYTKQALEQLGFKVNVESTDAGGWASRTGNWDFDLTTTFTYQ
YGDPALGVQRLYISSNIVKGSPFANVQGYSNPETDKLWEAAASEVDPAKRQALYTQIQTT
LVNEVANGFLVDMEFPTLYRANVKNLVKTAIGLNESFDDVYIEKK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatcgaaaaactggttttccctaagcatcggcgcattggtccttgcggccgcgctg
cccgccacgcaggccttggcccagaccaagggaggcacgctgaacatgatcgtgcagccc
gaaccgccggtgatcgtcacggccatcaatcagcaggggccgacgcaattcgtcgcgggc
aagatctacgagagcctgctgacctactccaccgacctcaagccgcagcccggactggcc
aagtcgtgggaggccgccgccgatgggctgacctacaccttccatctgcaggacaacgtg
aagtggcatgacggcaagccgttcacgtccgaggacgtggtgttctcgctggcggacatg
ctgcccaagacccacgcgcgtgcccgcgtcatcctgaacaagttcgtcgagtccgtgcag
gcgcccgacgccaagacggtggtcatcaagctgaagacgccgtttccggccttcatgctg
atgttcgaacccggttttgcgccgatgatgcccaagcatctgtacgccggcacggactac
atgaccaacccggccaaccagaagcccgtgggcaccggcccgttcgtcttcaaggaatgg
aagcgcggcgaatacatcaagctggcccgcaatcccgattactggaagccgggcaagccg
tatctggacgagctggtgttcaacgtgattccggatgcggcgtcgcgcgccgtggccttc
gagcgcggcagcgtggacgtgctgcgcggcggcgacgtggacaacgtcgacatcaagcgc
ctgcgcggcctgcccaacgtggaatacacgaccgcgggctgggaaatgttctcgccgcag
gcctacctgatcttcaacatgcgtaagccgcccttcgacaacctgaaggtgcgccaggcg
gtcatggcggccatgaaccgcaacatggtggtcaacaacatcttcttcggtctgggcaag
gtgtcgaccagccccttcgtgaccaccgagatgttctacgacaagaacatgccgccgatg
cccttcgacatgaagaaggcgcgcgcgctgatcaaggaatcgggcatcaagcccggcgac
tacacgatccgccaactgagcttcccgtatggctcgacctgggaccggctgggtgaatac
accaagcaggcgctggaacagctgggcttcaaggtgaacgtggaatccaccgacgcgggc
ggctgggcaagccgcaccggcaactgggacttcgacctgaccaccaccttcacgtaccag
tacggcgaccccgcgctcggcgtgcagcgcttgtatatctcgtcgaacatcgtcaaggga
tcgccctttgccaatgtgcagggctacagcaaccccgagaccgacaagctgtgggaggcc
gccgcctccgaggtcgatccggccaagcgccaggccctctacacccagatccagacgacg
ctcgtcaacgaggtcgccaatggcttcctggtcgacatggagtttccgaccctgtatcgc
gccaacgtgaagaacctggtcaagaccgccatcggcttgaacgaatcgttcgacgacgtc
tacatcgagaagaagtaa
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