Achromobacter sp. JD417: LN047_12535
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Entry
LN047_12535 CDS
T11120
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
achj Achromobacter sp. JD417
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
achj03000
]
LN047_12535
03036 Chromosome and associated proteins [BR:
achj03036
]
LN047_12535
Transcription factors [BR:
achj03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
LN047_12535
Chromosome and associated proteins [BR:
achj03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LN047_12535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
MarR
MarR_2
HTH_20
HVO_A0114
DUF7343
Dimerisation
DDRGK
HTH_11
Fe_dep_repress
HTH_IclR
NirdL-like_HTH
HTH_DeoR
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
XGB30087
LinkDB
All DBs
Position
complement(2718449..2718916)
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AA seq
155 aa
AA seq
DB search
MRDLDRIDLKILDILQREGRISVTELAERVSLSATPCSDRVKRMEREGVITGYHARVNPA
ALGKNLLVFLEIKLSAKSGDVFDKVKKELLYVPEVMECHLVSGDFDYLVKARLTEMNEYR
RLLGEILKRLPASAESHSYIVMEEIKETLFLPVDR
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacctcgaccgaatcgacctcaaaatcctcgatatcctgcagcgcgaaggccgg
atttcggtcaccgaattggcagagcgcgtcagcctgtcggccaccccctgctccgaccgc
gtcaagcgcatggagcgcgagggcgtcatcacgggttaccatgcgcgcgtcaatccggcg
gcgctgggcaagaacctgctcgtcttcctggaaatcaagctgtcggccaagtccggcgac
gtcttcgacaaggtcaagaaagagctgctgtatgtcccggaagtcatggagtgccacctg
gtgtcgggcgacttcgactatctggtcaaggcccgcctgaccgaaatgaacgagtaccgc
cgtcttttgggcgaaatcctcaagcgcctgcccgcctccgccgaatcgcacagctacatc
gtgatggaggaaatcaaggagacgctctttctgccggtggaccggtag
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