Achromobacter sp. JD417: LN047_13285 Help Entry LN047_13285       CDS       T11120                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism achj  Achromobacter sp. JD417 Pathway achj02020   Two-component system achj02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:achj00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     LN047_13285  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     LN047_13285  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:achj03021]     LN047_13285 Transcription machinery [BR:achj03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      LN047_13285 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Motif Other DBs NCBI-ProteinID:  XGB30228 LinkDB All DBs Position complement(2885899..2887344) Genome browser AA seq 481 aa AA seqDB search MQELRLRQQMTLAPRLQQSVKLLQMSALEFTTAVQHALASNPFLEDPDDSEPESAAPAAP GVRVETADMEGQPAPEPVAASDSPDGDEPPPDAPAYSGDYPTHTSSGGDSDLGQWACANV SMRDRLSFELGNYHLQPRDRLLAEFIIDALDDDGYLRTPLSALCTAADEDISPLPEESEW MAALRLVQQLDAPGIAARDLRECLILQLAALPDEDDDTRALAQKIVQEHLERLGKNDYVG LRRALGCGDDALRDACALIRRLDPKPGGRYSGDTPVYVVPDVFVDKWQGRWRVLPNRSAM PRARLHSAYADLFRRARLDDRSPMAQELQEARWLVRNVEQRYTTIQRVAEAIVKRQQMFF EYGEVALRPLMLREVADDLNMHESTVSRATVSKYMTTPRGVFEFRHFFSRELATESGGSC SAAAVRALIKEMVDAEDPAMPLSDVALTQQLASNGILLARRTVSKYRGQLRVPPAELRRQ H NT seq 1446 nt NT seq  +upstreamnt  +downstreamnt atgcaagaacttcgcctgcgccagcaaatgacgctcgcgccgcgtctgcaacagtccgtc aagctgcttcagatgtcggcgcttgaattcacgaccgccgtgcagcatgcactggcttca aacccttttctcgaagatcccgacgattcggagcccgagtcggcggccccagccgcgcct ggcgtgcgcgtcgagacggcggacatggaaggacagcccgccccggaacccgttgcggcc tcagacagccctgacggtgacgagcccccgcccgacgcgcccgcctattccggcgactac cccacccacacgtcctcgggcggcgacagcgatctgggccaatgggcctgcgccaacgtg tcgatgcgcgatcgcctgtccttcgaactgggcaactatcacctgcagccgcgtgatcgc ctgctggcggagttcatcatcgacgcgctggacgacgatggctacctgcgcaccccgctg tccgcgctttgcaccgccgcggacgaggacatcagcccgcttccggaggaatccgaatgg atggcggcgctgcgcctggtgcagcagctggacgcccccggcattgccgcgcgcgacttg cgcgagtgcctgatcctgcaacttgccgcgctgccggacgaagacgatgacacgcgcgca ctggcccagaaaatcgtccaggaacatctggagcggctgggcaagaacgattacgtcggc ctgcgccgcgcgctgggatgtggcgatgacgccctgcgagacgcctgcgcgctgatccgc cggctggaccccaagcccggcggccgctacagcggagacacgccggtgtacgtggtgccg gatgtctttgtggacaaatggcagggacgctggcgcgtgctgcccaatcgcagcgccatg ccgcgcgcgcgcttgcacagcgcctatgcagatctctttcgccgcgcccgcctggacgac cgcagccccatggcgcaggaactccaggaagcgcgttggctggtgcgcaatgtcgaacag cgctacaccacgatccagcgcgtggccgaggccatcgtgaagcgccagcagatgttcttc gaatatggcgaagtggcgctgcgcccgctcatgctgcgcgaagtggcggacgacctgaac atgcacgagtccaccgtctcgcgcgcgaccgtgagcaagtacatgaccacgccccgcggg gttttcgagttccgccacttcttctcgcgtgaactggccacggagtcgggcggatcgtgt tccgcagccgcagtgcgtgcgctcatcaaggaaatggtggacgccgaagatccggcaatg cccctgtccgacgtggcgctgacgcagcagctggcttccaacggcatcctgctggcccgc cgcaccgtgtcgaagtaccgcggccaactgcgcgtgccgcccgccgagctgcgccgccag cactga

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