Achromobacter sp. JD417: LN047_15230
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Entry
LN047_15230 CDS
T11120
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
achj Achromobacter sp. JD417
Pathway
achj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LN047_15230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achj03400
]
LN047_15230
DNA repair and recombination proteins [BR:
achj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LN047_15230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
DUF4778
Motif
Other DBs
NCBI-ProteinID:
XGB25250
LinkDB
All DBs
Position
3331370..3332350
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AA seq
326 aa
AA seq
DB search
MAARTIWKGAISFGLVHIPVGLHTATTESGVDFDWLDKRSMDPVGYKRINKRTGKEIDKD
NIVKGVEYEDGKYVIVSPDEIADAYPRTTQTIEIQQFVDATDVSFVYLERPYYVAPINKG
HKVYALLRDTLAKTGKIGIAKVVIQTKQHLAALIPSGDALVLNLMRWGDEVKSVEGLDLP
KAGAKNMTPSASELKMAKMLVEDMSGQWDPEQYQDEFKAAVMALVEKKASAGKTETVIEP
QEKSPAYADNVIDLTELLQRSLKGGKGASKAASSAGKAGNGAAKKAAQSASKKTAAKKTT
AKTTGSASKASGKTASKTASKARKAA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaagaaccatatggaaaggggccatttccttcggtctggttcacatccccgtg
ggcctgcacacggccaccaccgagtcgggcgtggatttcgactggctggacaagcgctcg
atggacccggtgggctacaagcgcatcaacaagcggaccggcaaggaaatcgacaaggac
aacatcgtgaagggcgtcgagtacgaagacggcaagtacgtcatcgtgtcgcccgacgaa
atcgccgatgcgtatccccggaccacgcagaccatcgagatccagcagttcgtggacgcc
acggacgtgtccttcgtctatctggagcggccgtattacgttgcgcccatcaacaagggg
cacaaggtgtatgccttgctgcgcgacaccctggccaagaccggcaagatcggtatcgcc
aaggtcgtgatccagaccaaacagcacctggccgcgctgatcccgtcgggcgacgcgctg
gtgctgaacctgatgcgttggggcgatgaggtcaagtcggtcgaagggctggatcttccc
aaggcgggcgccaagaacatgacgcccagcgccagcgagctgaagatggccaagatgctg
gtggaggacatgtccggccaatgggatcccgaacagtaccaggacgaattcaaggccgcg
gtgatggcgctggtggaaaagaaggcgagcgccggcaagacggagacggtcatcgagccg
caggaaaagtcgcccgcttacgccgacaacgtcatcgacctgacggagttgctgcaacgc
agcctgaagggcggcaagggcgcgtccaaggccgcgtcgtcggcgggcaaggccggcaat
ggcgccgcaaaaaaagcggcccaatctgcttccaagaagacggctgcaaaaaagacaacg
gccaaaaccacgggcagcgccagcaaggcgtccggtaagaccgcttccaagacggcgagc
aaagcgcgcaaggcggcttga
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integrated database retrieval system
