Achromobacter sp. JD417: LN047_16135
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Entry
LN047_16135 CDS
T11120
Name
(GenBank) TRAP transporter large permease subunit
KO
K21393
TRAP-type transport system permease protein
Organism
achj Achromobacter sp. JD417
Pathway
achj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LN047_16135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
achj02000
]
LN047_16135
Transporters [BR:
achj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LN047_16135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DctQ
DUF3865
DUF6142
Motif
Other DBs
NCBI-ProteinID:
XGB25420
LinkDB
All DBs
Position
3509171..3511051
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AA seq
626 aa
AA seq
DB search
MASLSAPHAAAPALPANPLRRAAGALDTVLGTVVEHVAAAIVLVEIIVLFAGVVSRYVFH
SPLVWSDELASILFLWLSMLGAVVALRRGEHMRMTALVNNVSPARRAQLETAALAASLAF
LVLILAPAIEYAHEEHFIITPALELSNAWRAAAIPVGMGLMGIIALLRLLRTQPLPQVAM
ALAGVAAVVGIFWMAQPLFSGLGKLNLVIFFVGIVAATVFSGVPIAFSFALATFSYLALT
TNTPMVVMVGRLDEGMSHLMLLAVPLFIFLGSLIEMTGMARAMIQFLASLLGHVRGGLSY
VLIGAMYLVSGISGSKIADMAAIAPVLFPEMKKRGAKPGDLVALLSATGAQTETIPPSIV
LITIGSVTGVSIAALFTGGLLPAVVLGLALCTVVWWRYRKEDLSLVQRFTFKEIGRFFMI
ALPAVALPFVIRAAVVEGVATATEVSTIGIVYSAVVGLLIYRCFDWARVKPMLIETASLS
GAIMLIVGCATAMAWALTQSGFSGDLAKLMAGMPGGSYGFLAVSIVAFIILGSVLEGIPA
IVLFGPLLFPIAVQAGVHEVHYAMVVIFAMGIGLFAPPFGVGYYGACAISRVDPNEGIRP
IWGYIGALLIGLIVVAAFPWFSIGFL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcctccctgtccgctccccacgccgcggcgcctgcgctgccggccaatcccctgcgc
cgggcggccggcgcgctcgacaccgtgctgggcaccgtggtcgaacacgttgccgcagcc
atcgtgctggtcgagatcatcgtcctgtttgccggcgtggtgtcgcgctacgtgttccat
agcccgctggtctggtccgatgaacttgcctccatcctgttcctctggctgtccatgctg
ggcgccgtcgtggccctgcggcgcggcgaacacatgcgcatgacggcgctggtgaacaac
gtcagcccggcacgccgggcgcagctggaaaccgcggcgctggcggcatcgctggccttt
ctggtgctgatcctggcgcccgccatcgaatatgcgcacgaagagcatttcatcatcacc
cccgcgctggagctgagcaacgcctggcgcgccgccgccatcccggtcggcatgggcctg
atgggcatcatcgcgctgctgcgcctattgcgcacgcagccgctgccgcaggtcgcgatg
gcgctggccggcgtggccgccgtcgtcggcatattctggatggcgcagccgctcttttcg
gggctgggcaagctgaacctggtgatcttcttcgtgggcatcgtcgccgccaccgtgttt
tcgggcgtgccgatcgcgttctccttcgcgcttgccacgttctcgtatctggcgctgacc
accaacacgccgatggtcgtcatggtgggccggctggacgaaggcatgtcgcacctgatg
ctgctggcggtgccgctcttcatcttcctgggttcgctcatcgaaatgacgggcatggcg
cgcgccatgatccagttcctggccagcctgctcggccacgttcgcggcgggctgtcctac
gtgctgatcggcgccatgtacctggtgtccggcatctcgggttccaagatcgccgacatg
gcggccatcgcgcccgtgctgttccccgaaatgaaaaagcgcggcgccaagcccggtgac
ctagtcgccctgctgtcggccaccggcgcgcagaccgaaacaattccgccgtccatcgtg
ctcatcaccatcggttcggtgacgggcgtgtcgattgccgcgctgttcacgggcggcctg
ctgcccgccgtggtgctgggcctggccctgtgcaccgtggtctggtggcgctaccgcaag
gaagacctgagccttgtgcagcgcttcaccttcaaggagatcggccgcttcttcatgatc
gcgctgcccgccgtggccctgcccttcgtgatccgcgccgccgtcgtcgaaggcgtggcg
accgccaccgaggtctccaccatcggcatcgtgtactccgccgtcgtgggcctgttgatc
taccgctgcttcgactgggcgcgcgtcaagcccatgctgatcgagaccgcgtccctgtcc
ggcgccatcatgctgatcgtgggctgcgcgaccgccatggcgtgggcgctgacccaatcg
ggcttctcgggcgacctggccaagctgatggcgggcatgcccggcggcagttacggcttc
ctggcggtgtccatcgtggccttcatcatcctgggcagcgtgctggaaggcatccccgcc
atcgtgctgttcggtcccctgctgttcccgatcgcggtgcaggctggcgtgcacgaggtc
cactacgcgatggtcgtgatctttgcgatgggcattggcctgttcgccccgcccttcggt
gtcggctactacggcgcctgcgccatcagccgcgtcgatcccaacgaaggcatccgcccg
atctggggctacatcggcgcgctgctgatcggcctgatcgtcgtggccgccttcccctgg
ttctccatcggtttcctgtga
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