Achromobacter sp. JD417: LN047_16540
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Entry
LN047_16540 CDS
T11120
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
achj Achromobacter sp. JD417
Pathway
achj00541
Biosynthesis of various nucleotide sugars
achj01100
Metabolic pathways
achj01250
Biosynthesis of nucleotide sugars
Module
achj_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LN047_16540 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
achj01005
]
LN047_16540 (kdsA)
Enzymes [BR:
achj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
LN047_16540 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
achj01005
]
Lipid A
LN047_16540 (kdsA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
XGB25497
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Position
complement(3591285..3592142)
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AA seq
285 aa
AA seq
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MTAPEVVISSSIACANDRPFVLFGGINVLESKELALRACEEYQRVTRKLGIPYVFKASFD
KANRSSIHSYRGPGLEEGMKIFEAVKKEFGVPVITDVHEPWQAAPVAEVADILQLPAFLA
RQTDLVVAMAKTQRVVNIKKPQFLSPTQMLNIVEKFTEAGNDKLILCDRGTSFGYDNLVV
DMLGFGVMKKVSGNRPLIFDVTHALQQRSALDAASGGRREQVAELARAGMAVGLAGLFLE
AHPDPKNAKCDGPSALPLDKLEPFLTQLKQLDDLVKSFAPIDIEP
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccccagaagtcgtaatttcctcctcgatcgcctgcgcgaacgatcggcctttc
gtgctgttcggcggcatcaatgtcctggaatccaaggaattggcgctgcgcgcttgcgag
gaataccagcgcgtgacgcgcaaactgggcatcccctacgtcttcaaggcgtcgttcgac
aaggccaaccgctcgtccatccattcgtatcgcggtcccggactggaggagggcatgaag
atcttcgaagccgtgaaaaaggagttcggcgttccggtcatcaccgacgtgcacgagcct
tggcaggccgcgccggtcgccgaagtcgccgacatcctgcaactgcccgcattcctggcc
cgccagaccgacctggtcgtcgcgatggccaagacgcaacgcgtggtcaacatcaagaag
ccgcagttcctcagtcccacgcaaatgctcaacatcgtcgagaagttcaccgaggccggc
aacgacaagctgattctctgcgatcgcggcacgagcttcggctacgacaacctggtcgtc
gacatgctgggctttggcgtgatgaaaaaagtgtccggcaaccgtccgcttatctttgac
gtgacccacgcgctgcagcagcgatcggccctggacgccgcatccggcgggcgccgcgaa
caggtggccgaactggcgcgcgcgggcatggcggtcggtctggcgggcctcttcctggaa
gcccatcccgatcccaagaacgcaaagtgcgacggtcccagcgctttgccgctggacaag
ctggagcccttcctgacgcaactcaagcagcttgacgacctggtgaagtcttttgcgccc
atcgacatcgagccctga
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