Achromobacter sp. JD417: LN047_16595
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Entry
LN047_16595 CDS
T11120
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
achj Achromobacter sp. JD417
Pathway
achj03420
Nucleotide excision repair
achj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LN047_16595
03430 Mismatch repair
LN047_16595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achj03400
]
LN047_16595
Enzymes [BR:
achj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LN047_16595
DNA repair and recombination proteins [BR:
achj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LN047_16595
MMR (mismatch excision repair)
Other MMR factors
LN047_16595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
T7SS_EccA1_N
Motif
Other DBs
NCBI-ProteinID:
XGB25507
LinkDB
All DBs
Position
complement(3601976..3604270)
Genome browser
AA seq
764 aa
AA seq
DB search
MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFGLLAVTFTN
KAAREMLARMSAILPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQSFQILDVTDQLAAIK
RLMKANGVDDEKYPPRDVQRFINGAKEEGLRPADVEAYDAHRRRLIEIYQLYEAQCQREG
VVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAAIFA
VGDDDQSIYAFRGANVGNMADFERDYAHGTVIRLEQNYRSYGHILDSANALIGHNSGRLG
KNLWTDQGEGEPVRVIEQPSDGMEAQWIVDEIRSLIHEGSDRREIAVLYRSNAQSRVIEH
AIFSAGIPYKVYGGLRFFERQEIKHALAYLRLMANPHDDTSWMRVVNFPTRGIGARTLEQ
LADAAREHDTSLYGAVARVAGKGGSNLAQFAQLIHRLIEETRELPLPEMVEHMLEASGLN
AHYKAEREGAERLENLNELITAAAVFASEENYDGMPAGQVPDGDTSSTLMPGVVDAPAVA
GDNLTPLAAFLSHAALEAGDNQAQQGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHEN
SILEPAGLEEERRLMYVAITRARQRLYISLAQSRMLHGQTRYAMRSRFLDEIPEQHLKWL
TPKAGLAPVSATGAGWGGGNRGDAFGRKPTNTIAPRQPRGVATGVTVGDKQYRVGQGVRH
ARFGDGTIIGLSGAGQDAQAEIHFRDVGAKTLALGIAKLDIVQG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgatgctagagaagctcaatcctgaacaacgcgccgcagtaacgttagaaccgcagcac
gccctggtcttggccggggcgggcagcggcaagacccgggtgctcaccacccgcatggcc
tggctgattcaaaccggccaggcttcgccttttgggcttctggcggtcacgttcaccaac
aaggcagcccgcgagatgctggcgcgtatgtctgccatcctgccgatcgatacgcgcggc
ctctggatcggcacgttccacggcctttgcaaccgcatgctgcgcgcgcatcaccgcgac
gctggcctgccgcagagctttcagatcctggacgtcacggaccagcttgcggccatcaag
cgcctcatgaaggccaacggcgtggacgacgaaaagtacccgccccgcgatgtgcagcgc
ttcatcaacggcgccaaggaagagggcctgcgccccgccgacgtcgaagcctacgacgcg
caccgccgccgcctgatcgagatctaccagctctacgaagcgcagtgccaacgcgaaggc
gtggtggactttgccgagctgctgctgcgcgcctatgagctgctgtcgcgtaacgcgccc
gtgcgcgagcactaccagcgccggttccgccacatcctcgtcgacgagttccaggacacc
aacacgctgcaatacaagtggcttcgcctgctggcgggcggtggcgcggccatcttcgcc
gtgggcgacgacgaccaatccatctacgccttccgcggcgccaacgtcggcaacatggct
gacttcgagcgcgactatgcgcatggcaccgtgatccgcctggagcagaactaccgctcg
tacggtcatatcctggattcggccaatgcgctcatcggtcacaactcgggacgcctgggc
aagaatctctggaccgaccagggcgagggcgaaccggtgcgcgtcatcgagcagccgtcc
gatggcatggaagcgcagtggatcgtggacgagatccgttcccttatccatgaaggcagc
gaccgccgggaaatcgccgtgctgtatcgcagcaacgcgcagtcgcgcgtcatcgagcac
gccattttctcggccggcatcccgtacaaggtgtatggcggcctgcgctttttcgaacgc
caggaaatcaagcacgcgttggcctacctgcgcctgatggccaatccgcacgacgatacg
tcgtggatgcgggtggtcaatttccccacgcgcgggatcggggcacgcacgctcgaacag
ctggccgatgccgcgcgcgagcacgacaccagcctgtatggcgcggtggcgcgggttgcg
ggcaagggcggatccaatctggcccagttcgcgcagctgattcatcggctcatcgaagaa
acccgcgagctgccgctgcccgaaatggtcgagcacatgctcgaggccagcggcctgaac
gcccactacaaggccgagcgcgaaggcgccgaacggctggaaaacctgaacgaactcatc
acggccgcggcggtgtttgcgtccgaggaaaactacgacggcatgcccgccggccaagtg
cctgacggtgacacgtcctccacgctcatgccgggtgtggtggacgcgcctgcagtggca
ggcgacaacctgacgcccctggccgcgttcctgtcgcatgcggcgctcgaggccggcgac
aaccaggcccagcaaggccaggatgccgtccagctcatgacggtgcatgccgccaagggc
ctggaattcgacgccgtgttcatcaccggcctggaggaagggctgttcccgcacgagaac
agcatcctcgagccggccggcctggaagaagagcgccgcctcatgtacgtggcgatcacg
cgcgcgcggcagcgcctgtacatcagcttggcgcaaagccggatgctgcatggccagacg
cgatacgccatgcgctcgcgctttctggatgaaattcccgagcagcacctgaagtggctg
acccccaaggccgggctggccccggtcagcgcgacgggtgcggggtggggcggcggcaac
cgcggcgatgcctttggccgcaagccgaccaacaccattgcgccgcgtcaaccccgcggt
gtcgctaccggcgtcacggtgggcgacaagcagtatcgtgtggggcagggtgtgcgtcac
gcgcgtttcggcgacggcacgatcatcggcctgagcggcgcgggacaggacgcccaggcg
gaaatccacttccgcgatgtcggcgccaagactttggcgctcggcatcgccaagctcgac
attgttcagggttga
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integrated database retrieval system
