Achromobacter sp. JD417: LN047_16885
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Entry
LN047_16885 CDS
T11120
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
achj Achromobacter sp. JD417
Pathway
achj00541
Biosynthesis of various nucleotide sugars
achj01100
Metabolic pathways
achj01250
Biosynthesis of nucleotide sugars
Module
achj_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LN047_16885 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
achj01005
]
LN047_16885 (kdsB)
Enzymes [BR:
achj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
LN047_16885 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
achj01005
]
Lipid A
LN047_16885 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
XGB25559
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Position
3674225..3674989
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AA seq
254 aa
AA seq
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MSFIAIIPARTASTRLPDKPLADIAGKPMVVRTADRAALSGASQIFIATDDLRVQQAVQA
HGLRALMTRGDHPTGTDRLAEAVEQLGLPDDAIVVNVQGDEPLIEPELIDAVAAKLQAYP
QADIATCACPLADAEALFNPNVVKLVCAADDRALYFSRAPIPWARDALAGGARVLADGLP
AWHHIGLYAYRASFLRRFPTLPQGTLERFESLEQLRAMEHGHTIVVHRASTPPAGGVDTP
ADLERVRLIYSKPI
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttcatcgccatcattccggcgcgcaccgcctcgacccgcctgcccgacaagccg
cttgccgacatcgccggcaaacccatggtcgtgcgcaccgcggatcgcgccgcgctgtcg
ggcgcctcgcagatcttcatcgcgaccgatgacctgcgcgtgcagcaggcggtgcaggcg
cacgggctgcgcgccctgatgacccgcggcgaccaccccaccggcacggaccgattggcc
gaggcggtcgagcaactgggcctgcccgacgacgcgatcgtcgtgaacgtgcaaggcgac
gagcccctcatcgaacccgaactcatcgacgcggtcgccgccaagctgcaggcctatccg
caggcggacatcgccacctgtgcgtgcccgctggccgacgccgaggcgttgttcaatccc
aacgtcgtcaagctcgtctgcgcggcggacgatcgcgcgctgtacttttcgcgcgccccc
attccgtgggcgcgcgacgcgctggcgggcggcgcacgcgtgctggccgacggcttgccc
gcctggcatcacatcggcctgtacgcctaccgcgcctcgttcctgcgccggttccccacg
ctgccgcaaggcacgctggaacgcttcgaatcgctggagcaactgcgcgccatggagcat
ggccacacgatcgtcgtccatcgggcgtcgacgcctcctgcaggcggggtagataccccg
gccgacctggagcgcgtccgcttgatctacagcaaaccgatataa
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