Achromobacter sp. JD417: LN047_18320
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Entry
LN047_18320 CDS
T11120
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
achj Achromobacter sp. JD417
Pathway
achj00061
Fatty acid biosynthesis
achj00071
Fatty acid degradation
achj01100
Metabolic pathways
achj01212
Fatty acid metabolism
achj02024
Quorum sensing
achj04146
Peroxisome
Module
achj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LN047_18320
00071 Fatty acid degradation
LN047_18320
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LN047_18320
09145 Cellular community - prokaryotes
02024 Quorum sensing
LN047_18320
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
achj01004
]
LN047_18320
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
achj04147
]
LN047_18320
Enzymes [BR:
achj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LN047_18320
Lipid biosynthesis proteins [BR:
achj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LN047_18320
Exosome [BR:
achj04147
]
Exosomal proteins
Exosomal proteins of breast milk
LN047_18320
Exosomal proteins of breast cancer cells
LN047_18320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
XGB25825
LinkDB
All DBs
Position
3990279..3992036
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AA seq
585 aa
AA seq
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MERIWHKSYPYGVPAEIGTDSATTLVTIIQESFRRFPGKTAYISMGKSITYAELDALTRR
FAAWLHANGLGRGDRVALMMPNLLQYPVCLFGALRAGCIVVNCNPLYTAHELEHQLADAG
ARAIVVADNFAATLQKALPATQIERVLVTSIGEMLGPIKGRLVDFAVRRVKRMVPAWSLP
GSQKLGDALRQARDLPFTDVPLTAADLAFLQYTGGTTGVAKAAMLSHGNLVANVSQAYAW
VRPLVKDGEECIVTALPLYHIFALTANCLTFMKLGASNLLIINPRDIPGLIKEMGKVPFS
AFTGVNTLFNALLNHPDFAHLDFSRLRLTMGGGMAVQRSVADRWRAATGVSIAQAYGLTE
TSPAVTINPLDTKIFNGSIGLPVPSTDLSIRDDAGRELGVGENGEICVRGPQVTQGYWNR
PDETALVMYPDGFLRTGDIGYVDETGYVYLVDRKKDMILVSGFNVYPNEVEDVAALHPGV
REVAAVGVPDKRSGEAVKLYVIRKDPTLDADTLIAHCRTQLTGYKVPRYIEFRDDLPRTT
VGKILRRELRPDAQGAAPANAPHAATDAIGNAPAPAITRQATGQD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaacgaatctggcacaagagctatccctacggtgtgcccgccgagatcgggaccgac
agcgcgaccacccttgtgacgatcatccaggaaagcttccggcgctttcccggcaagacg
gcctacatcagcatgggcaaatcgatcacctatgccgaactggacgcgctgacgcgacgc
ttcgccgcatggctgcacgcgaacggccttggccgcggcgaccgcgtcgcgctgatgatg
cccaatctgctgcagtaccccgtctgcctcttcggcgccctgcgcgccggctgcatcgtg
gtgaactgcaacccgctctacaccgcgcacgagcttgaacaccagcttgccgatgcgggc
gcgcgcgccatcgtggtcgcggacaacttcgcggccacactgcaaaaggcgttgcccgcc
acgcaaatcgagcgtgtgctggtgacgtccatcggcgagatgctgggtcccatcaagggt
cgtcttgtggactttgccgtgcggcgcgtcaagcgcatggtgccggcgtggtcgctgccc
ggatcgcagaaactgggcgatgcgctgcgccaagcccgcgacctgccgttcaccgacgtg
ccgctcacggctgccgacctggcgttcctgcagtacacgggcggcacgaccggcgtggcc
aaagccgccatgctgtcgcacggcaacctggtggcaaacgtcagccaggcctacgcctgg
gtcaggcccctggtgaaagacggcgaggaatgcatcgtcacggccctgccgctgtatcac
atctttgcgctgacggcgaattgcctgacgttcatgaaactgggcgcaagcaacctgctc
atcatcaatccgcgcgatattccggggctgataaaagaaatgggcaaggtgccgttctcg
gcattcactggcgtgaacacgctctttaacgcgctgctcaaccacccggattttgcccac
ctggatttctcgcggctgcgcttgacgatgggcggcggcatggcggtgcagcgctcggtg
gcagaccgctggcgcgccgcgacgggcgtgtcgatcgcgcaggcttacgggcttacggaa
acgtcgcccgccgtcaccatcaatcccctggacaccaagatcttcaacgggtccatcggc
ttgcccgtgccctccaccgacctgtcgatccgcgacgacgccggccgcgaactgggggtc
ggggaaaacggcgagatctgcgtgcgcggcccgcaggtcacgcagggctattggaaccgg
ccggacgagacggcgctggtcatgtacccggacggcttcctgcgcacgggcgacatcggt
tacgtcgacgagacggggtatgtctatctggtcgaccgcaagaaggacatgatcctggta
tcgggctttaacgtgtatccgaacgaagtcgaggacgtggccgcgctgcacccgggcgtg
cgcgaggtggcggcggtgggcgtgcccgacaagcgctccggcgaagccgtcaagctctac
gtcatccgcaaggatcccacgctggacgcggacacgttgatcgcgcattgccgcacgcag
ctcacggggtacaaggtgcctcggtatatcgaattccgcgacgacctgccgcgcaccacc
gtgggcaagatcctgcggcgcgaactgcgtccggacgcgcaaggcgcggcgccggccaat
gcgccccacgcggcgaccgacgccatcggcaacgcccccgctcccgccatcacccgccag
gcgaccggccaggactga
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