Achromobacter sp. JD417: LN047_18650
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Entry
LN047_18650 CDS
T11120
Name
(GenBank) LysR family transcriptional regulator
KO
K13794
LysR family transcriptional regulator, regulatory protein for tcuABC
Organism
achj Achromobacter sp. JD417
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
achj03000
]
LN047_18650
Transcription factors [BR:
achj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LN047_18650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
DUF3772
Motif
Other DBs
NCBI-ProteinID:
XGB25883
LinkDB
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Position
4057815..4058741
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AA seq
308 aa
AA seq
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MELRQLRYFVRVAELGSIGRAARDLGVVASALSQQISRLESELATRLLTRSTTGVTTTPA
GAAFLRQAQLTLRHAESAVAAAREARLAGTVSVGFAPTTASLLARPFYAAMTERYPNVRL
HLVEGLSGNLGDLLNARRLDLAVLFQNDSAQGRSVVPVLDERLFLLAPRGMMERPDGEPV
RMADLAGLPLAVTSKAHGLRAWVEAAFERAGIEPWIGVEVDGLTTLMDLVQAHPIATIQP
GAAVARVETGLLSMHPIDDPYLFRRNQIYCISDDELSPAALAARVVLLDAMRALVRHGGW
PGATLLDS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaattgcgccaactccgttacttcgtccgcgtcgccgaactgggcagcattggccgg
gccgcgcgagacctgggcgtggtggcctcggcgctcagccagcagatcagccggctggaa
agcgagctggccacgcggctgctcacgcgcagcaccacgggcgtgaccaccacgcccgcc
ggcgcggccttcctgcggcaggcgcagctgacgctgcggcacgcggaaagtgccgtcgcg
gccgcgcgcgaggcgcggttggccggcacggtcagcgtcggtttcgcgcccaccaccgcg
tcgctgctggcgcgtccgttctatgccgccatgaccgagcgctatcccaacgtgcgcctg
catctggtcgagggcctgtcgggcaacctgggcgacctgctcaacgcccgccggctggat
ctggccgtcctgtttcagaacgacagcgcgcaaggccgcagcgtggtgccggtgctggac
gaacgcctgttcctgctggccccgcgcggcatgatggagcgccccgatggcgaacccgtc
cgcatggccgatctggcggggctgccgcttgccgtcaccagcaaggcgcacgggctgcgc
gcgtgggtcgaggcggctttcgagcgggccggcatcgagccctggatcggcgtcgaggtc
gacggcctgacgacgctgatggacctggtgcaagcccatccgatcgcgacgatccagccc
ggcgctgccgtggcccgcgtcgaaaccgggctgctcagcatgcaccccatcgacgacccg
tatctctttcgccgcaaccagatctactgcatcagcgacgacgagctctcgcccgcggcc
ctggccgcgcgtgtggtgctgctggacgccatgcgcgccctggtccggcacggcggctgg
ccaggcgccacccttctcgattcgtga
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