Achromobacter sp. JD417: LN047_20065
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Entry
LN047_20065 CDS
T11120
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
achj Achromobacter sp. JD417
Pathway
achj03030
DNA replication
achj03430
Mismatch repair
achj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LN047_20065 (holA)
03430 Mismatch repair
LN047_20065 (holA)
03440 Homologous recombination
LN047_20065 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
achj03032
]
LN047_20065 (holA)
03400 DNA repair and recombination proteins [BR:
achj03400
]
LN047_20065 (holA)
Enzymes [BR:
achj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LN047_20065 (holA)
DNA replication proteins [BR:
achj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LN047_20065 (holA)
DNA repair and recombination proteins [BR:
achj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LN047_20065 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
XGB26146
LinkDB
All DBs
Position
4355893..4356948
Genome browser
AA seq
351 aa
AA seq
DB search
MAQPLDADRLAEHLQRPGNRLAPLYAVSGDEPLLVTEAVDALRAAARNAGYTERLSMVMD
ARSDWSAVIAATQSVSLFGDRRILEIKIPTGKPGKSGADTLTKLAEQAEKQPDADTLVLI
ALPRLDKATRESRWMQALARAGMAVDIANIERGRLPAWVGMRLARQNQRADSATLQWMAD
KVEGNLLAAHQEIQKLGLLYPEGQLAPEDVERAVLNVARYDVFGLRDAMLAGDIGRTIRM
IDGLRAEGEALPLVLWAVGEEIRLLARIAEARALGQDAGGLMRRLRIFGAHERLALQALN
RVQPNVWPAAVQHAHEVDRLIKGLSVPGRLSDPWEEMTRLALRVAAAGGRP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcctctggacgcggatcggctggccgaacacctgcagcggcccggcaaccgc
ctggcgccgctgtacgcggtgtcgggcgacgagccgctgctggtgaccgaagccgtcgac
gcgcttcgcgccgccgcacgcaacgccggctacaccgagcgcctgtccatggtgatggac
gcgcgcagcgactggagcgcggtcattgccgccacccagagcgtgtcgctctttggcgac
cgccgcatccttgaaatcaagatacccaccggcaagccgggcaaatccggcgccgacacc
ctgaccaagctggccgaacaggccgaaaagcagccagacgccgacaccctggtgctgatc
gcgctgccccgtcttgacaaggccacccgcgaaagccgctggatgcaggcgcttgcccgc
gccggcatggccgtcgacatcgccaacatcgagcgcggccgcctgcccgcctgggtcggc
atgcgcctggcgcgccagaaccagcgcgccgacagcgccaccctgcaatggatggccgac
aaggtcgaaggcaacctgctcgccgcccaccaggaaatccagaagctgggcctgctctac
cccgaaggccagcttgcccccgaggacgtcgagcgcgccgtgctgaacgtcgcccgctac
gacgtcttcggtttgcgcgatgccatgctggccggcgacatcggccgcaccatccgcatg
atcgacggcctgcgcgccgaaggcgaagcgctgccgctggtgctgtgggcagtcggcgaa
gaaatccgcctgctggcccgcattgccgaggcgcgtgcgctgggccaggacgcgggcggc
ctcatgcgccgcctgcgcattttcggcgcgcatgaacgccttgcgctgcaggccctgaac
cgggtgcagcccaacgtctggcccgccgccgtgcagcacgcccacgaagtcgaccgcctg
atcaagggcctgtcggtgcccggacgcctgtcggacccctgggaagaaatgacgcggctg
gccctgcgcgtggccgccgccggcggccgaccgtga
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