Achromobacter sp. JD417: LN047_21660
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Entry
LN047_21660 CDS
T11120
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
achj Achromobacter sp. JD417
Pathway
achj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LN047_21660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achj03021
]
LN047_21660
Transcription machinery [BR:
achj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LN047_21660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_23
PhyR_sigma-like
HTH_24
HTH_11
Sigma70_ECF
HTH_3
HTH_28
HTH_17
MerR
HTH_40
Phage_terminase
GerE
Rv2175c_wHTH
TnsD
Motif
Other DBs
NCBI-ProteinID:
XGB26433
LinkDB
All DBs
Position
complement(4699720..4700238)
Genome browser
AA seq
172 aa
AA seq
DB search
MLPPSTITSDHPLLARIYTEDRPWLLGRLYTRLRNLEDAEDVAGDTFVQLIQTPRLDSVR
EPRALIITIAKRLVWKLWRRRELEAAWLESLFLQGEQFAPSPQEQLAILQTLQQVDQMLD
GLSAKARAAFLYSQLDGLTHKEIAAALGVSVSMVRQYIAQALQRCYALADSP
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgccttccacgattacctcggaccatcctctgctggcccggatctacaccgaa
gacaggccatggctgctgggcaggctctacacccggctgcgcaacctcgaagacgccgaa
gacgtcgccggcgacacgttcgtccagctcatccagacgccgcggctcgactccgtgcgc
gagccgcgcgccctcatcatcaccatcgccaaacgcctcgtctggaaactgtggcgccgc
cgcgagctggaagccgcgtggctggaaagcctgttcctccagggcgagcagtttgccccg
tcgccgcaggagcagcttgcgatcctgcagaccctgcagcaggtggaccagatgctcgac
ggcctgtcggcgaaggcgcgcgccgcgtttctatacagccaactcgatggcctgacccac
aaggagatcgccgccgcgctgggcgtgtcggtcagcatggtgcgccagtacatcgcgcag
gcgctgcagcgctgctacgcgctggcggactcgccatga
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integrated database retrieval system
