Achromobacter sp. JD417: LN047_22245
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Entry
LN047_22245 CDS
T11120
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
achj Achromobacter sp. JD417
Pathway
achj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LN047_22245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achj03021
]
LN047_22245
Transcription machinery [BR:
achj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LN047_22245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
DUF8048
HTH_23
Motif
Other DBs
NCBI-ProteinID:
XGB26534
LinkDB
All DBs
Position
4818447..4818959
Genome browser
AA seq
170 aa
AA seq
DB search
MPPAHFASSAEFVSLYREHHGWLVQMLRRRLAGNADNAADLAHDTFERVMRSESRAAFAE
PRGFLTTVAKRLLIDQSRRRAIEQAYLETLAARSEAVEPSPETHALVVEALDAVCRMMEQ
LPARVRRVFVLAQVEGLPYLDVARALGISVAAVQRDMIKAWEHCYAVLYA
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcccgcccactttgcgtcctccgccgaattcgtcagcctgtaccgcgagcaccat
ggctggctggtgcagatgctgcgccgacggcttgccggcaatgccgacaacgccgccgat
ctggcgcacgacacgttcgaacgggtcatgcgcagcgaatcgcgcgccgcgtttgccgag
ccgcgcggttttttgaccacggtggccaagcgcctgttgatcgaccagtcgcggcggcgg
gcgatcgagcaggcttatcttgagacgcttgccgcgcgcagcgaagcggtcgagcccagc
cccgagacgcatgcgctggtggtggaagcgctggacgccgtgtgccgcatgatggagcag
ttgccagcgcgcgtgcgccgggttttcgtgctggcgcaggtggaaggcctgccgtatctg
gacgtcgcccgcgcgctgggcatttcggtcgcggccgtgcagcgcgacatgatcaaggcg
tgggaacactgctacgcggtgctgtacgcatga
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