Achromobacter sp. JD417: LN047_22480
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Entry
LN047_22480 CDS
T11120
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
achj Achromobacter sp. JD417
Pathway
achj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LN047_22480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achj03021
]
LN047_22480
Transcription machinery [BR:
achj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LN047_22480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_11
PhyR_sigma-like
GerE
HTH_29
HTH_17
HTH_24
HTH_Tnp_4
Xre-like-HTH
HTH_38
Rv2175c_wHTH
MerR
HTH_40
DUF8040
TnsD
HVO_A0261_N
HTH_7
HTH_20
HTH_IclR
HTH_Tnp_ISL3
HAC6_helical
HTH_31
Motif
Other DBs
NCBI-ProteinID:
XGB26579
LinkDB
All DBs
Position
complement(4869563..4870072)
Genome browser
AA seq
169 aa
AA seq
DB search
MPNSVLASGDAVNLLYRAHHGWLHGWLRAKLGNSFDAADLAQDTFVRVLRHRHELDALRE
PRAYLTTIAKRLLLNHHRRRSVEQAYMEALALMPEALAPSAEQRLIILETLQEIEEMLAG
LSLPARQAFLMAQLEGLSHAEIASRLDVSLRTVHRYITKGLEQCIMAVM
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaattccgtgctcgcctcgggcgacgccgtcaacctgctgtaccgcgcccatcac
ggatggctgcatggctggctgcgcgccaagctgggcaacagcttcgatgccgccgatctt
gcgcaggacacgttcgtgcgcgtgttgcgccaccggcacgaactggatgcgctgcgtgaa
ccgcgcgcctacctgaccaccatcgccaagcgcctgctgctgaaccaccatcgccgccgc
tcggtcgagcaggcgtacatggaggcgctggcgctgatgcccgaggcgctggcgccgtcc
gcggagcagcgtctcatcatcctggaaacgctgcaggagatcgaagaaatgctggccggc
ctgtcgctgcccgcccgccaggcgttcctgatggcgcaactggaggggctgagccacgcc
gagatcgccagccggctcgatgtgtcgctacgcaccgtgcaccgctacatcaccaaggga
ctcgagcaatgcatcatggcggtgatgtga
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