KEGG   Achromobacter sp. JD417: LN047_23670
Entry
LN047_23670       CDS       T11120                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
achj  Achromobacter sp. JD417
Brite
KEGG Orthology (KO) [BR:achj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:achj02044]
    LN047_23670 (tssF)
Secretion system [BR:achj02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LN047_23670 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: XGB26801
LinkDB
Position
complement(5140252..5142090)
AA seq 612 aa
MEELLPYYERELGFLRTSSRDFAERYPKIAARLGLSGETCEDPHVERMIESFALLSARIN
KKLDDDYPEFTEALFEVMYPHYLRPFPSCSIAQFDLGGAGAQLTAPVRIARGTELKSHPV
RGVSCRFRTTYDVTLAPVEVLRAGFESSANAPATAKLPAGVTGRFSVTLGCQGENQHFGA
LGVDRLRVYLHGEPSFVAALRDALFLRAAAAYVELQPGRWDRLPAIPVGQVGLAEEDALI
DFPASSHPAYRLLAEYFVFSEKFNFVDIDLAALRPYLGTVRQFTLHLPVSGLRADSNTAR
LLESTSADNLRLGCTPVSNLFSQRADPIRVTHASASYPVVADARRAYGYEVYSIDRVRQV
RQNAQGDAVVEFRPFYSLHHGESPDKAGHYWTMRRDASMAQRSPGYETEISIVDIDFDPS
VPQTETLSLDLTCTNRDLPSQIAVGQAGGDLFLEGGSVARTIRMLRRPTHSHRFQQGRAA
HWRLISHLALNHLSLVQSGLPALKETLRLYDLSGSAVAARQIEGLVGLDYKPATHWMPGE
PFATFVRGIEIRLTVNEDHFVGTSLHTFVAVINRFFGLYVHANSFVQLVVLSRRGAEELL
RCPPCNGDAILA
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggaagaattgctgccttattacgagcgcgaactgggctttctgcgcacgtcgtcgcgc
gacttcgccgaacgctacccgaagatcgccgcgcggctcggcctgtcgggcgagacctgc
gaagatccgcacgttgaacgcatgatcgagtcgttcgccttgttgagcgcccgcatcaac
aagaagctggacgacgactacccggaattcaccgaagcgttgttcgaggtgatgtacccg
cattacctgcggccatttccctcttgcagcatcgcgcagttcgaccttggcggcgcgggc
gcgcaactgaccgcgccggtccggatcgcgcgcggcacggaactcaagtcgcacccggtc
cggggcgtgtcgtgccgctttcgcaccacttatgacgtcacgctggcgcccgttgaagtg
ctgcgcgccggctttgagtccagcgccaacgcgcccgccacggccaagctgccggccggc
gtgaccggacgcttttccgtcaccctgggctgccagggcgagaaccagcatttcggggcc
ctgggcgtggaccggcttcgggtgtacctgcacggtgaaccgtcattcgtggcggcattg
cgtgacgcgctgttcctgcgcgccgccgcggcctacgtcgagctgcaaccgggacgctgg
gatcgtctgcccgccattccggtcgggcaggtgggcctggcggaagaagacgcgctgatc
gactttccggccagttcgcacccggcgtatcgcctgctggccgagtacttcgtgttctcg
gaaaaattcaacttcgtggacatcgacctggccgcgctgcgcccctatctgggcacggtg
cgccagttcacgctgcacctgccggtcagcggcctgcgcgcggattccaataccgcgcgg
ctgctggaatcgacgtccgccgacaatctgcggctcggctgcacgccggtgtccaacctg
ttctcgcagcgcgccgatcccatccgcgtcacgcatgcgtcggcgtcgtacccggtggtg
gcggacgcgcggcgggcctatggctacgaggtctattcgatcgaccgcgtgcgccaggtg
cgtcagaacgcgcagggcgatgcggtcgtggaattcaggccgttctattcgctgcaccat
ggcgaatcgcccgacaaggcgggccactactggacgatgcggcgcgatgcgtcgatggcg
cagcgcagtccgggctacgagacggagatttcgatcgtcgatatcgacttcgacccgtcg
gtgccgcagaccgaaacgctgagcctggacctgacctgcaccaatcgggacttgccgtcg
cagattgcggtcgggcaggcgggcggcgatctgtttctggaaggcggctcggtggcccgc
acgatccgcatgctgcgccgcccgacgcattcgcaccggttccagcagggccgagcggcg
cattggcgtctgatttcgcatctggcgctgaaccatctgtccctggtgcaaagcggtctg
ccggcgctcaaggaaacgctgcgcctgtacgacctgtccggctcggcggtggccgcgcgc
cagatcgaagggctggtcggactggactacaagcccgccacgcactggatgccgggcgaa
ccgttcgccaccttcgtgcgcggcatcgaaatccggctgaccgtcaatgaagaccacttc
gtgggcaccagcctgcacacgttcgtggcggtcatcaatcgcttcttcggcctgtatgtg
cacgcgaacagtttcgtgcagttggttgtgttgtcgcgccgcggcgcggaggaacttcta
cgatgccccccttgcaacggcgacgccatcctagcgtga

DBGET integrated database retrieval system