Achromobacter sp. JD417: LN047_24060
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Entry
LN047_24060 CDS
T11120
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
achj Achromobacter sp. JD417
Pathway
achj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LN047_24060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
achj02000
]
LN047_24060
Transporters [BR:
achj02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LN047_24060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XGB26876
LinkDB
All DBs
Position
complement(5228672..5230225)
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AA seq
517 aa
AA seq
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MTMQHKWRQLALGIGACALVAFASGAQAADTPKKGGTLRYGTVSEIVSLDPHVYGGSAWK
VLIESLYSPLVGYDKTGAVVPRLAQRWEQPDARTIVFHLRPDVKFQNGTPVTADDVKFSL
DRILDPSTGATLRSNLLGATVTVIDPATVKVEKPSPDATLLGVLALPEAAIVSRKWVQDG
ANLKLTANGTGPFQLKSYEPAVRASLARNPSYFIAGQPYLDAVDFRMIKSDDARVNALRS
QSLDMIDFVPWKDIDVLRRNAGMKIDMAGGAFMSVWFNTSKKPFDDVRVRRAVSYAIDRE
AVSKAAFFGHGQPIYGAPTPPDSPYYNKALDGTFKRDVKQARALLAEAGYANGIDASMVV
FQGLGIYTTMAQVVQANLKEAGINLKLEPVEWATLVERKNRGDYESMIYGVSVKLPDPDA
YAYYLGGDSSYWAKPIGYRDPELEKLLADGRALTDPKARQPIYAQAEKRILDTSPWVFVN
WREQAQGYLRKVQGYTQLGGALSESSPGISLPTMWLN
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaacataaatggcgccagctggcgttgggaattggggcctgcgcactggtg
gcgtttgcgtcgggggcccaggcggccgacacgcccaagaagggcggcaccctgcggtac
ggcacggtatccgaaattgtgtcgctggacccgcatgtgtatggcggcagcgcatggaaa
gtgttgatcgaatcgctctacagtcccttggtcggctatgacaagactggggccgtggtg
ccccgcctggcgcagcggtgggaacagccggatgcccgcaccatcgtgttccacctgcgt
ccggacgtgaagttccagaacggcacgccggtcacggcggacgacgtcaagttctcgctg
gaccgcatcctggacccatcgaccggcgccacactccgatccaacctcttgggcgctacg
gtgacggtcatcgatccagcaacggtcaaagtggaaaaaccgtcgcctgacgccacgttg
ctgggggtgttggccttgccggaagccgccatagtgtcgcgaaaatgggtgcaggacggt
gccaatctgaagctgaccgccaatggcacgggcccatttcagttgaagagctatgagcca
gcggtgcgcgccagcctggcccgcaatcccagctacttcatcgcgggccagccttatctg
gacgcggtggatttccgcatgatcaagagcgacgatgcacgcgtgaatgcgctgcgcagt
cagtccttggacatgatcgacttcgtgccgtggaaagacatcgacgtgctgcgccgcaat
gcgggcatgaagatcgacatggcgggcggcgcattcatgagcgtctggttcaacaccagc
aaaaaaccgttcgacgatgtgcgggtgcgacgcgccgtgtcctacgcgatcgatcgagaa
gccgtctcgaaagcggccttttttggtcatggccagcccatctatggtgcgcccacccca
ccggactcaccgtattacaacaaggcgctggacggcactttcaagcgcgacgtgaagcag
gcgcgcgccttgctggccgaggcgggatacgccaatggaatcgatgcgtcgatggtggtg
tttcagggcctgggcatctatacgacgatggcgcaagtcgtgcaggccaacttgaaggaa
gccggcatcaacctgaagctggaaccggtggaatgggcgacgctggtggaacgcaagaac
cggggtgactacgagtccatgatttacggtgtgtcggtcaagctgccggatcccgacgct
tacgcctattacctgggcggcgattccagctactgggccaaacccatcggctatcgtgac
cctgaattggaaaagctgctggcggacggccgggcgttgacggacccgaaagcgcgccag
cccatctacgcgcaagccgaaaagcgcatcctggataccagcccctgggtgtttgtgaac
tggcgtgaacaggcgcaagggtatctgcgcaaggtacagggctacacgcaactgggcggg
gcgttgagcgagagcagcccgggcatttcgttgcccaccatgtggctgaactga
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