Achromobacter sp. JD417: LN047_24580
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Entry
LN047_24580 CDS
T11120
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
achj Achromobacter sp. JD417
Pathway
achj00260
Glycine, serine and threonine metabolism
achj00630
Glyoxylate and dicarboxylate metabolism
achj00670
One carbon pool by folate
achj00785
Lipoic acid metabolism
achj01100
Metabolic pathways
achj01110
Biosynthesis of secondary metabolites
achj01200
Carbon metabolism
Module
achj_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LN047_24580 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LN047_24580 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LN047_24580 (gcvP)
00670 One carbon pool by folate
LN047_24580 (gcvP)
Enzymes [BR:
achj01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
LN047_24580 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
XGB26975
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All DBs
Position
complement(5349510..5352383)
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AA seq
957 aa
AA seq
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MSRALDTHTDFIPRHIGPSDADQAAMLAVIGSDSLDALIEEVVPPKIRSQAPLALPASRS
EADVLAELKQVAGRNKVYRSYIGQGYYGTQTPNVVLRNILENPAWYTAYTPYQPEISQGR
LEALLNYQTMVADLTGLDISNASLLDESTAAAEAMTLARRSAKSKSPVFFISRHVHPQTI
EVVRTRAEGLDIEIRIGDEAEGLPECFGVLLQYPHSTGAVSDYRKLAEAAHAQGAVVACA
TDLLALAVLAAPGEWGADIAVGSAQRFGVPFGFGGPHAGFMACKDAFKRNMAGRLVGVSK
DAQGNPALRLALQTREQHIRREKATSNICTAQVLLAVMAGMYAVWHGPAGIRRIAQRVQR
ATAILRAELIKLDIKVVNDTFFDTLLLETGAATPAILTAADCAHINLRRVDGARLAVSLD
ETVTVADLQALVNVFAAGLERDDVELDIDALDAAAPSGIPASVARESAILTHPIFSSVQS
ETDMLRYLRKLADKDLALDRTMIPLGSCTMKLNATAEMIPITWPEFALIHPFAPASQSQG
YVELIDRLSAALCEITGYDNISLQPNSGAQGEYAGLLAIRGYHQANGQHQRNICLIPSSA
HGTNPASAQLAGMDVVVVASDANGNVDLTDLRAKIAQVGDKLAALMITYPSTHGVFEEAV
TEICDLVHQAGGQVYLDGANMNAMVGVAKPGKFGSDVSHLNLHKTFCIPHGGGGPGVGPV
AVRAHLAPYLPGVVNEQGKLPGDAKVGPVSAAPFGSAGILPIPFVYIALMGADGLRRATE
VAILNANYIATRLRDHYPVLYAGRNGRVAHECILDVRPLKETSGISAEDIAKRLMDYGFH
APTMSFPVAGTLMVEPTESEGVAELDRFIDAMIAIREEIAQVERGERDRDDNVLKNAPHT
AQMLLAEEWLHDYPRQQAAYPVATLRDGKYWPPVARVDNAYGDRNLVCACLPIEAYA
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcgccctagacacccataccgacttcattccccgccacatcggcccctccgac
gccgaccaggccgccatgcttgccgtgatcggcagcgacagcctggacgccctgatcgaa
gaagtcgtgcctcccaagatccgcagccaggcgccgctggcgctgcccgcctcgcgcagc
gaagccgacgtgctggccgaactgaagcaggtggcgggccgcaacaaggtctaccgcagc
tacatcgggcaggggtactacggcacgcagacgcccaacgtggtgttgcgcaacattctt
gaaaatcctgcctggtacacggcctacacgccgtaccagcccgagatctcgcagggccgc
ctggaggcgctgctgaactaccagaccatggtcgccgacctgaccggcctggacatctcc
aacgcctcgctgctggacgaaagcacggccgccgccgaagcgatgacgctcgcgcgccgc
agcgccaagtccaagagcccggtgttcttcatctcgcgccacgtgcatccgcagaccatc
gaagtcgtgcgcacgcgcgccgaaggcctggacatcgagatccgcatcggcgacgaagcc
gaaggcctgcccgagtgctttggcgtgctgctgcaatacccgcacagcacgggcgccgtg
tccgactaccgcaagctggccgaagccgcccacgcgcaaggcgccgtggtggcgtgcgcg
acggacctgctggcgctggccgtgctggccgccccgggcgagtggggcgccgacatcgcc
gtcggttcggctcagcgcttcggcgtgccgttcggctttggcggcccgcacgcgggcttc
atggcctgcaaggacgccttcaagcgcaacatggccggccgcctggtcggcgtgtccaag
gacgcgcagggcaaccccgcgctgcgcctggcgctgcagacgcgcgaacagcacatccgc
cgcgagaaggccacctccaacatctgcacggcgcaggtgctgctggcagtgatggccggc
atgtacgccgtgtggcacggtcccgccggcatccgccgcatcgcccagcgcgtgcagcgc
gccaccgcgatcctgcgcgccgaactcatcaagctggacatcaaggtcgtcaacgacacc
ttcttcgacacgctgctgctggaaaccggcgccgcaacgcctgccatcctgacggccgcc
gactgcgcccacatcaacctgcgccgcgtcgacggcgcgcgcctggcggtttcgctggac
gaaaccgtgaccgtggccgacctgcaggcgctggtcaacgtcttcgccgccggcctggag
cgcgatgacgtcgaactcgacatcgacgcgctcgacgccgcagcccccagcggcatcccc
gcctcggtggcccgcgaaagcgccatcctgacgcatcccatcttctccagcgtccagtcc
gaaaccgacatgctgcgctacctgcgcaagctggccgacaaggacctggccctggaccgc
acgatgatcccgctgggttcgtgcaccatgaagctgaacgccacggccgagatgatcccc
atcacctggcccgaattcgcgctgatccacccgttcgcgcccgcctcgcaaagccagggc
tacgtcgaactgatcgaccgcctgtcggccgcgctgtgcgaaatcaccggctacgacaac
atcagcctgcagcccaactcgggcgcgcagggcgaatacgcgggcctgctcgccattcgc
ggttaccaccaggccaacggccagcaccagcgcaacatctgcctgatcccgtcgtcggcg
cacggcaccaaccccgcctcggcgcagctggccggcatggacgtggtggtggtggcctcg
gacgccaatggcaacgtggacctcacggacctgcgcgccaagatcgcgcaggtcggcgac
aagctggccgcgctgatgatcacgtacccgtccacgcacggcgtgttcgaagaagccgtg
accgaaatctgcgatctggtgcatcaggccggcggccaggtttacctggacggcgccaac
atgaacgcaatggtcggcgtggccaagcccggcaagttcggctcggatgtgtcccacctg
aacctgcacaagacgttctgcattccgcacggcggcggcggccccggcgtgggccccgtg
gcggtgcgcgcgcacctggcgccgtatctgccgggcgtcgtgaacgaacagggcaagctg
cccggcgacgccaaggtcggcccggtctcggccgctccgttcggctccgccggcatcctg
ccgatcccgttcgtgtacatcgcgctgatgggcgcggacggtctgcgccgcgccaccgaa
gtcgccatcctgaacgccaactacattgccacccgcctgcgcgaccactacccggtcctg
tacgcgggccgcaacggccgcgtggcgcacgagtgcatcctggacgtgcgcccgctcaag
gaaaccagcggcatcagcgccgaagacatcgccaagcgcctgatggattacggcttccat
gcgcccacgatgagcttcccggtggccggcacgctgatggtcgagccgaccgaatccgaa
ggcgtggccgaactggaccgcttcatcgacgcgatgatcgccatccgcgaagagatcgcg
caggtcgaacgcggcgaacgcgaccgtgacgacaacgtcctgaagaacgcgccgcacacc
gcccagatgctgctggccgaggaatggctgcacgactacccgcgccagcaggccgcctac
ccggtggccacgctgcgcgacggcaagtactggccgccggtcgcacgtgtcgacaacgca
tacggcgatcgcaatttggtctgcgcgtgcctgccgatcgaagcgtacgcatag
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